Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC246785.4-201ENST00000605374 287 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AC096772.1-201ENST00000609146 564 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB40BQ12829 AC078883.4-201ENST00000623218 367 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 U6.114-201ENST00000636407 96 ntBASIC2.04□□□□□ -2.08
RAB40BQ12829 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.04□□□□□ -2.08
RAB40BQ12829 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.04□□□□□ -2.08
RAB40BQ12829 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RAB40BQ12829 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RAB40BQ12829 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAB40BQ12829 MTND5P17-201ENST00000418405 1603 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAB40BQ12829 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RAB40BQ12829 OR56A5-201ENST00000340110 738 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 SNORD115-7-201ENST00000365306 82 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 RNU2-52P-201ENST00000410680 190 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 RNU2-63P-201ENST00000410792 194 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 RPL21P90-201ENST00000415692 466 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC138623.1-201ENST00000418060 216 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 C1DP2-201ENST00000418167 426 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 MTCYBP5-201ENST00000423752 1135 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 CETN4P-201ENST00000432407 469 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 MTCO3P5-201ENST00000433620 714 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40BQ12829 CALM1P1-201ENST00000442082 433 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40BQ12829 AL109933.2-201ENST00000452651 260 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AL139109.1-201ENST00000455491 297 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC090515.1-201ENST00000465295 476 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 CKS1BP2-201ENST00000497342 240 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC008526.1-201ENST00000509149 338 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AF213884.2-201ENST00000510417 903 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC026407.1-201ENST00000518369 204 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC021269.2-201ENST00000532318 330 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40BQ12829 OSBPL9P5-201ENST00000542581 171 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 MTCYBP33-201ENST00000575007 1130 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 MIR5692A1-201ENST00000580523 69 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC008088.1-201ENST00000580993 280 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC006023.1-201ENST00000603944 259 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AL138963.2-201ENST00000605137 226 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 AC073114.1-201ENST00000612027 490 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 SCARNA4-202ENST00000625402 129 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 MIR3529-201ENST00000637713 78 ntBASIC2.03□□□□□ -2.08
RAB40BQ12829 RBBP8P1-201ENST00000449447 1844 ntBASIC2.03□□□□□ -2.09
RAB40BQ12829 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB40BQ12829 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAB40BQ12829 RNU6-942P-201ENST00000363002 107 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 SNORA62.1-201ENST00000364287 154 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 RNU6-116P-201ENST00000384042 109 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 RN7SKP142-201ENST00000411236 328 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40BQ12829 BX295541.1-201ENST00000417774 250 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 PGBD4P6-201ENST00000421501 610 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 TOMM20P4-201ENST00000427861 435 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB40BQ12829 AC000111.3-201ENST00000433478 193 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 MTND1P27-201ENST00000451117 902 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB40BQ12829 RPL7P43-201ENST00000478876 753 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40BQ12829 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.02□□□□□ -2.09
RAB40BQ12829 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40BQ12829 HMGB3P3-201ENST00000510526 400 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 AC091965.2-201ENST00000512324 613 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 Y_RNA.687-201ENST00000516558 91 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB40BQ12829 AP003072.2-201ENST00000527756 676 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40BQ12829 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40BQ12829 AL590229.1-201ENST00000603497 542 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 SNORD14A-201ENST00000606526 91 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 AC093788.1-201ENST00000609356 927 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
RAB40BQ12829 AC009233.1-201ENST00000616477 371 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 MIR5739-201ENST00000619803 80 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.02□□□□□ -2.09
RAB40BQ12829 AC006020.1-201ENST00000420179 1854 ntBASIC2.02□□□□□ -2.09
RAB40BQ12829 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAB40BQ12829 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RAB40BQ12829 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
RAB40BQ12829 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAB40BQ12829 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40BQ12829 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.01□□□□□ -2.09
RAB40BQ12829 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40BQ12829 RNU1-72P-201ENST00000362976 153 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 SNORD114-19-201ENST00000363072 75 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 RNU6-1097P-201ENST00000363586 107 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 RNU6-371P-201ENST00000364283 108 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 RNU6-384P-201ENST00000364900 104 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 RNU6-108P-201ENST00000365558 107 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.01□□□□□ -2.09
RAB40BQ12829 RNU6-301P-201ENST00000384277 107 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 AF228730.1-201ENST00000397972 663 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.01□□□□□ -2.09
RAB40BQ12829 OR6C66P-201ENST00000414917 930 ntBASIC2.01□□□□□ -2.09
RAB40BQ12829 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.01□□□□□ -2.09
RAB40BQ12829 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.01□□□□□ -2.09
RAB40BQ12829 EIF4EP4-201ENST00000424916 578 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms