Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 MTND4P20-201ENST00000424125 869 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.19□□□□□ -2.06
CSTF1Q05048 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.19□□□□□ -2.06
CSTF1Q05048 RPS3AP22-201ENST00000488297 769 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 RPL22P13-201ENST00000493291 347 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.19□□□□□ -2.06
CSTF1Q05048 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSTF1Q05048 AC109927.2-201ENST00000506416 303 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.19□□□□□ -2.06
CSTF1Q05048 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.19□□□□□ -2.06
CSTF1Q05048 OR5B19P-201ENST00000531766 928 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.19□□□□□ -2.06
CSTF1Q05048 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.19□□□□□ -2.06
CSTF1Q05048 RPS15AP11-201ENST00000594193 385 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 WISP1-OT1-201ENST00000602893 642 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 AL022161.1-201ENST00000604390 213 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 AP002360.4-201ENST00000606980 481 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 MIR6766-201ENST00000622641 72 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSTF1Q05048 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.19□□□□□ -2.06
CSTF1Q05048 Z75746.1-201ENST00000440243 2080 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 AL109809.4-201ENST00000603520 2185 ntBASIC2.19□□□□□ -2.06
CSTF1Q05048 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.18□□□□□ -2.06
CSTF1Q05048 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSTF1Q05048 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSTF1Q05048 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CSTF1Q05048 HSPE1P11-201ENST00000339579 310 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 RNY1P12-201ENST00000364251 105 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 Y_RNA.269-201ENST00000364685 89 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSTF1Q05048 AL591416.1-201ENST00000404015 867 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 U6atac.2-201ENST00000408644 118 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.18□□□□□ -2.06
CSTF1Q05048 AC108667.1-201ENST00000428618 249 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AL445646.1-201ENST00000431784 216 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 CETN4P-201ENST00000432407 469 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.18□□□□□ -2.06
CSTF1Q05048 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.18□□□□□ -2.06
CSTF1Q05048 AL031659.1-201ENST00000447075 539 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AC012308.1-201ENST00000451232 178 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AL583843.1-201ENST00000456070 346 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 snoU109.2-201ENST00000459316 135 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.18□□□□□ -2.06
CSTF1Q05048 AC068781.1-201ENST00000488231 618 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AC005178.1-201ENST00000508392 440 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.18□□□□□ -2.06
CSTF1Q05048 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AC009127.3-201ENST00000570531 403 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AC012213.3-201ENST00000577199 777 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 MIR1273C-201ENST00000578669 77 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.18□□□□□ -2.06
CSTF1Q05048 AC122133.1-201ENST00000613964 233 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSTF1Q05048 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
CSTF1Q05048 CKAP2P1-201ENST00000555477 2049 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.18□□□□□ -2.06
CSTF1Q05048 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 Y_RNA.118-201ENST00000363300 101 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 RNY4P34-201ENST00000364779 95 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 CISD1P1-201ENST00000393907 327 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 FGF7P8-201ENST00000402994 292 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 MIR1302-8-201ENST00000408342 128 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 RNA5SP270-201ENST00000411361 118 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AC127391.1-201ENST00000411737 98 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.17□□□□□ -2.06
CSTF1Q05048 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.17□□□□□ -2.06
CSTF1Q05048 RPS3AP44-201ENST00000425466 790 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AL591704.1-201ENST00000432574 275 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.17□□□□□ -2.06
CSTF1Q05048 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.17□□□□□ -2.06
CSTF1Q05048 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
CSTF1Q05048 RPL30P6-201ENST00000475925 342 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AC140059.1-201ENST00000489238 361 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AC026801.1-201ENST00000497178 464 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.17□□□□□ -2.06
CSTF1Q05048 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.17□□□□□ -2.06
CSTF1Q05048 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.17□□□□□ -2.06
CSTF1Q05048 AC108078.2-201ENST00000510750 236 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
CSTF1Q05048 RNU6-123P-201ENST00000516163 102 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 Y_RNA.672-201ENST00000516289 104 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.17□□□□□ -2.06
CSTF1Q05048 AP003122.4-201ENST00000530980 758 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 ADI1P3-201ENST00000549509 470 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 RPL21P5-201ENST00000554662 472 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AL138976.2-201ENST00000563989 694 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.17□□□□□ -2.06
CSTF1Q05048 AL161423.1-201ENST00000613700 262 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AL133173.2-201ENST00000614270 90 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AL359547.2-201ENST00000615810 418 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 MIR6134-201ENST00000617606 109 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 AL160394.1-201ENST00000624765 724 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSTF1Q05048 TEX21P-201ENST00000447107 1476 ntBASIC2.17□□□□□ -2.06
CSTF1Q05048 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms