Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC004383.1-201ENST00000438135 289 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 RPS24P1-201ENST00000438550 371 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC080013.2-201ENST00000460866 323 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 MTAPP1-201ENST00000489154 819 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC022493.1-201ENST00000492984 337 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC108078.2-201ENST00000510750 236 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 RNU6-123P-201ENST00000516163 102 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 CYCSP26-201ENST00000534107 320 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 MIR4782-201ENST00000577987 79 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 NRBF2P1-201ENST00000587407 859 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 CLIC4P2-201ENST00000601934 717 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC068276.1-201ENST00000605793 379 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AL121992.2-201ENST00000606262 256 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AL109809.4-201ENST00000603520 2185 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 Y_RNA.33-201ENST00000362591 102 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 SNORA16B-201ENST00000364674 135 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 RNU6-166P-201ENST00000384371 107 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 MIR518D-201ENST00000385014 87 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 USP9YP6-201ENST00000413550 854 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 OOSP1P1-201ENST00000423265 274 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC009961.2-201ENST00000435771 251 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMGCS1Q01581 AL033528.1-201ENST00000453780 140 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 MTCYBP1-201ENST00000454315 1119 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC068781.1-201ENST00000488231 618 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC026801.1-201ENST00000497178 464 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 RBBP4P6-201ENST00000508098 202 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC117522.2-201ENST00000510049 657 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 MIR892C-201ENST00000516410 77 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 SNORD19.2-201ENST00000516978 73 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 HSPE1P18-201ENST00000517602 280 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC007834.2-201ENST00000536310 343 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 LINC00933-203ENST00000559812 219 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AL138976.2-201ENST00000563989 694 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC025678.1-201ENST00000567861 338 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGCS1Q01581 DEFB131E-202ENST00000602581 683 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC090578.1-201ENST00000604955 591 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC069294.1-201ENST00000608397 350 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 MIR6134-201ENST00000617606 109 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC024940.5-201ENST00000622889 474 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC005858.4-201ENST00000623191 700 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 AC103710.2-202ENST00000641454 2853 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 CDC27P3-201ENST00000635418 1910 ntBASIC1.89□□□□□ -2.11
HMGCS1Q01581 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMGCS1Q01581 MTND5P30-201ENST00000452896 1731 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMGCS1Q01581 OR56A5-201ENST00000340110 738 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMGCS1Q01581 RNU6-641P-201ENST00000384006 107 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 RNU6-19P-201ENST00000384718 107 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 CISD1P1-201ENST00000393907 327 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AF228730.1-201ENST00000397972 663 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 RNU2-8P-201ENST00000410727 190 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 AL031779.1-201ENST00000415663 330 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 AC003685.2-201ENST00000422795 395 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGCS1Q01581 PTGES3P4-201ENST00000426243 356 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 MED13P1-201ENST00000428342 171 ntBASIC1.88□□□□□ -2.11
HMGCS1Q01581 RPL30P4-201ENST00000429309 333 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms