Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MTCO3P23-201ENST00000561363 289 ntBASIC3.1□□□□□ -1.91
HDAC4P56524 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.1□□□□□ -1.91
HDAC4P56524 MIR548S-201ENST00000581352 82 ntBASIC3.1□□□□□ -1.91
HDAC4P56524 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.1□□□□□ -1.91
HDAC4P56524 AL355073.2-201ENST00000612106 557 ntBASIC3.1□□□□□ -1.91
HDAC4P56524 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC4P56524 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC4P56524 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
HDAC4P56524 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC4P56524 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 Y_RNA.86-201ENST00000363020 111 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 U3.12-201ENST00000364498 214 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC4P56524 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC4P56524 SNORD70.1-201ENST00000391007 85 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 RNA5SP118-201ENST00000410385 109 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 HMGN2P35-201ENST00000412164 270 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 RPL26P27-201ENST00000414397 437 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 ERLEC1P1-201ENST00000433806 578 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 RPL23AP58-201ENST00000440453 469 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 AL353572.1-201ENST00000442490 417 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.09□□□□□ -1.91
HDAC4P56524 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC4P56524 RPL26P9-201ENST00000457466 433 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 RPS27P26-201ENST00000494583 239 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 RNU2-69P-201ENST00000516061 100 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 MTND4P7-201ENST00000523876 130 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC4P56524 AC023050.3-201ENST00000541142 333 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 OR11H5P-201ENST00000554039 926 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HDAC4P56524 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC4P56524 RPL23AP78-201ENST00000599928 470 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 NRBF2P5-201ENST00000603087 788 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 AC007938.3-201ENST00000604965 623 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC4P56524 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HDAC4P56524 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HDAC4P56524 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.09□□□□□ -1.91
HDAC4P56524 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC4P56524 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.09□□□□□ -1.91
HDAC4P56524 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC4P56524 MTND4P35-201ENST00000604257 1375 ntBASIC3.09□□□□□ -1.92
HDAC4P56524 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HDAC4P56524 SNORD3E-201ENST00000362899 217 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 RNU6-884P-201ENST00000363889 107 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 RNU6-876P-201ENST00000391295 104 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 Y_RNA.604-201ENST00000410574 102 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 MTCO2P3-201ENST00000442543 421 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.08□□□□□ -1.92
HDAC4P56524 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 AC114786.4-201ENST00000508771 728 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 CENPUP1-201ENST00000526649 1202 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 BNIP3P6-201ENST00000549284 499 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC4P56524 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 MIR5692A1-201ENST00000580523 69 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC4P56524 BNIP3P25-201ENST00000596023 559 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AC008739.2-201ENST00000597006 317 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AC021646.1-201ENST00000605469 484 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AC092807.2-201ENST00000609367 243 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
HDAC4P56524 U2.21-201ENST00000637295 81 ntBASIC3.08□□□□□ -1.92
HDAC4P56524 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC4P56524 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC4P56524 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HDAC4P56524 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC4P56524 Y_RNA.160-201ENST00000363677 92 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 Y_RNA.279-201ENST00000364763 95 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 RNU6-1303P-201ENST00000364841 107 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.07□□□□□ -1.92
HDAC4P56524 RNU1-109P-201ENST00000383960 147 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 BX682237.1-201ENST00000415016 335 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 RPL21P90-201ENST00000415692 466 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AL365496.1-201ENST00000426885 215 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.07□□□□□ -1.92
HDAC4P56524 AL121601.2-201ENST00000438019 707 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.07□□□□□ -1.92
HDAC4P56524 DYNLL1P5-201ENST00000467158 270 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AC091885.1-201ENST00000506658 268 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AC112206.3-201ENST00000514578 389 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.07□□□□□ -1.92
HDAC4P56524 AC090115.3-201ENST00000553218 849 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AL121579.1-201ENST00000555129 305 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 H3F3AP1-201ENST00000559984 334 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 HMGN2P15-201ENST00000585707 270 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AC018638.8-201ENST00000588755 281 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 AL355877.2-201ENST00000603670 358 ntBASIC3.07□□□□□ -1.92
HDAC4P56524 MTND4LP5-201ENST00000605152 292 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms