Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PKNOX1P55347 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PKNOX1P55347 MIR412-201ENST00000362142 91 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 RNU6-942P-201ENST00000363002 107 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PKNOX1P55347 RNU2-8P-201ENST00000410727 190 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC127391.1-201ENST00000411737 98 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.98□□□□□ -2.09
PKNOX1P55347 AC009518.2-201ENST00000418056 731 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AL356320.1-201ENST00000429616 163 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 MTATP6P16-201ENST00000434543 526 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
PKNOX1P55347 MTCYBP1-201ENST00000454315 1119 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC090572.1-201ENST00000519251 160 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC074050.1-201ENST00000563247 211 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.98□□□□□ -2.09
PKNOX1P55347 MIR548AC-201ENST00000585049 88 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC025165.5-201ENST00000602802 578 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC090578.1-201ENST00000604955 591 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AL138963.2-201ENST00000605137 226 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AL133173.2-201ENST00000614270 90 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.98□□□□□ -2.09
PKNOX1P55347 AC092656.1-203ENST00000624134 423 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PKNOX1P55347 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.98□□□□□ -2.09
PKNOX1P55347 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
PKNOX1P55347 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
PKNOX1P55347 Y_RNA.169-201ENST00000363745 96 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 RNY4P34-201ENST00000364779 95 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 RNU6-72P-201ENST00000384285 79 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 MT-TH-201ENST00000387441 69 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 RNU6-195P-201ENST00000411352 109 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 HMGN1P14-201ENST00000412459 517 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX1P55347 CALM2P2-201ENST00000428512 440 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX1P55347 AL627311.1-201ENST00000431514 115 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC009961.2-201ENST00000435771 251 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AL353706.1-201ENST00000436728 494 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.97□□□□□ -2.09
PKNOX1P55347 RPL7P12-201ENST00000446719 750 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AL360271.2-201ENST00000447710 161 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 NDUFB1P2-201ENST00000449477 176 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX1P55347 SNRPFP4-201ENST00000456366 242 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC118465.1-201ENST00000513820 1271 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX1P55347 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.97□□□□□ -2.09
PKNOX1P55347 OR5AQ1P-201ENST00000527596 927 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC012414.6-201ENST00000568241 401 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 MTCYBP33-201ENST00000575007 1130 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AL138889.2-201ENST00000603883 242 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 RNU6-91P-201ENST00000607774 107 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.97□□□□□ -2.09
PKNOX1P55347 AC063944.3-201ENST00000609969 533 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC008250.2-201ENST00000615261 205 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 DUXAP9-208ENST00000622815 614 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC019226.2-201ENST00000625973 424 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.97□□□□□ -2.09
PKNOX1P55347 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 AC009487.4-201ENST00000624969 3585 ntBASIC1.97□□□□□ -2.09
PKNOX1P55347 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
PKNOX1P55347 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PKNOX1P55347 RNU6-384P-201ENST00000364900 104 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 RNU1-148P-201ENST00000384472 162 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 RNU6-297P-201ENST00000384636 107 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 MIR10A-201ENST00000385043 110 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 SNORA46.1-201ENST00000391069 153 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 SNORA26.8-201ENST00000391306 124 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AL135786.1-201ENST00000415892 214 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.96□□□□□ -2.1
PKNOX1P55347 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.96□□□□□ -2.1
PKNOX1P55347 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX1P55347 snoU109.2-201ENST00000459316 135 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 MED28P2-201ENST00000475771 317 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.96□□□□□ -2.1
PKNOX1P55347 AC010486.2-201ENST00000505572 483 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX1P55347 Vault.3-201ENST00000516676 95 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX1P55347 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.96□□□□□ -2.1
PKNOX1P55347 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX1P55347 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.96□□□□□ -2.1
PKNOX1P55347 AC136619.2-201ENST00000563361 631 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AC145350.1-201ENST00000567426 208 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.96□□□□□ -2.1
PKNOX1P55347 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
PKNOX1P55347 AC108479.2-201ENST00000617314 601 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AC093648.1-201ENST00000623546 606 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 AL359740.1-201ENST00000624340 592 ntBASIC1.96□□□□□ -2.1
PKNOX1P55347 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.96□□□□□ -2.1
PKNOX1P55347 RNY1P12-201ENST00000364251 105 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms