Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 BNIP3P25-201ENST00000596023 559 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH11P55287 AL355598.1-201ENST00000604169 202 ntBASIC2.67□□□□□ -1.98
CDH11P55287 MTND4LP5-201ENST00000605152 292 ntBASIC2.67□□□□□ -1.98
CDH11P55287 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH11P55287 AC092807.2-201ENST00000609367 243 ntBASIC2.67□□□□□ -1.98
CDH11P55287 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CDH11P55287 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.67□□□□□ -1.98
CDH11P55287 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC103705.1-201ENST00000619013 241 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC073308.1-201ENST00000623696 305 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AL161431.1-201ENST00000618966 4205 ntBASIC2.67□□□□□ -1.98
CDH11P55287 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CDH11P55287 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDH11P55287 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH11P55287 Y_RNA.88-201ENST00000363029 99 ntBASIC2.66□□□□□ -1.98
CDH11P55287 Y_RNA.111-201ENST00000363248 100 ntBASIC2.66□□□□□ -1.98
CDH11P55287 Y_RNA.157-201ENST00000363638 102 ntBASIC2.66□□□□□ -1.98
CDH11P55287 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH11P55287 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH11P55287 Y_RNA.623-201ENST00000411128 95 ntBASIC2.66□□□□□ -1.98
CDH11P55287 POLHP1-201ENST00000411806 470 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AL353729.1-201ENST00000425044 720 ntBASIC2.66□□□□□ -1.98
CDH11P55287 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH11P55287 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH11P55287 PRPS1P1-201ENST00000445305 876 ntBASIC2.66□□□□□ -1.98
CDH11P55287 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AL583843.1-201ENST00000456070 346 ntBASIC2.66□□□□□ -1.98
CDH11P55287 RNU7-23P-201ENST00000459465 62 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AP001486.1-201ENST00000463339 476 ntBASIC2.66□□□□□ -1.98
CDH11P55287 RPL31P58-201ENST00000469001 379 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AC087884.1-201ENST00000469738 328 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AP000852.1-201ENST00000472460 573 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AL049873.1-201ENST00000480540 376 ntBASIC2.66□□□□□ -1.98
CDH11P55287 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH11P55287 PRDX4P1-201ENST00000507189 574 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH11P55287 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH11P55287 SNORA25.17-201ENST00000517184 124 ntBASIC2.66□□□□□ -1.98
CDH11P55287 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH11P55287 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH11P55287 AP000889.1-201ENST00000530968 660 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH11P55287 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH11P55287 AC107871.2-201ENST00000612894 502 ntBASIC2.66□□□□□ -1.98
CDH11P55287 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AP003122.6-201ENST00000623831 495 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AC090617.10-201ENST00000624308 134 ntBASIC2.66□□□□□ -1.98
CDH11P55287 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
CDH11P55287 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH11P55287 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDH11P55287 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH11P55287 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CDH11P55287 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CDH11P55287 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDH11P55287 MIR22-201ENST00000362190 85 ntBASIC2.65□□□□□ -1.99
CDH11P55287 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDH11P55287 SNORA44-201ENST00000384584 132 ntBASIC2.65□□□□□ -1.99
CDH11P55287 RPS4XP7-201ENST00000406274 780 ntBASIC2.65□□□□□ -1.99
CDH11P55287 RPL19P1-201ENST00000411635 428 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AL096701.2-201ENST00000416920 238 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH11P55287 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH11P55287 ARL5AP1-201ENST00000418991 388 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH11P55287 AL645937.1-202ENST00000421799 937 ntBASIC2.65□□□□□ -1.99
CDH11P55287 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.65□□□□□ -1.99
CDH11P55287 HMGB1P9-201ENST00000429856 646 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AL627311.1-201ENST00000431514 115 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.65□□□□□ -1.99
CDH11P55287 AL121601.2-201ENST00000438019 707 ntBASIC2.65□□□□□ -1.99
CDH11P55287 RPS29P6-201ENST00000438196 145 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AL078601.1-201ENST00000444542 271 ntBASIC2.65□□□□□ -1.99
CDH11P55287 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH11P55287 RPL26P9-201ENST00000457466 433 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AL031183.1-201ENST00000457667 207 ntBASIC2.65□□□□□ -1.99
CDH11P55287 RNU7-66P-201ENST00000459469 62 ntBASIC2.65□□□□□ -1.99
CDH11P55287 MTCO2P30-201ENST00000503662 364 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AC074344.1-201ENST00000512823 224 ntBASIC2.65□□□□□ -1.99
CDH11P55287 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDH11P55287 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH11P55287 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH11P55287 AC023050.3-201ENST00000541142 333 ntBASIC2.65□□□□□ -1.99
CDH11P55287 MTCO3P13-201ENST00000577757 781 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH11P55287 VN1R80P-201ENST00000597126 338 ntBASIC2.65□□□□□ -1.99
CDH11P55287 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.65□□□□□ -1.99
CDH11P55287 MIR7106-201ENST00000612419 65 ntBASIC2.65□□□□□ -1.99
CDH11P55287 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDH11P55287 U6.42-201ENST00000618440 107 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AL031601.2-202ENST00000622650 282 ntBASIC2.65□□□□□ -1.99
CDH11P55287 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH11P55287 AC099654.14-201ENST00000638599 341 ntBASIC2.65□□□□□ -1.99
CDH11P55287 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH11P55287 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH11P55287 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
CDH11P55287 AL035425.3-201ENST00000564206 4996 ntBASIC2.64□□□□□ -1.99
CDH11P55287 AC110491.1-201ENST00000562191 2010 ntBASIC2.64□□□□□ -1.99
CDH11P55287 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDH11P55287 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms