Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.88□□□□□ -1.47
HDGFP51858 MIR548X2-201ENST00000579776 100 ntBASIC5.88□□□□□ -1.47
HDGFP51858 AL133393.1-201ENST00000603277 287 ntBASIC5.88□□□□□ -1.47
HDGFP51858 AL161756.2-201ENST00000604597 246 ntBASIC5.88□□□□□ -1.47
HDGFP51858 RNU2-4P-201ENST00000606190 192 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.15-201ENST00000611544 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.16-201ENST00000613119 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.12-201ENST00000613778 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.9-201ENST00000615427 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.11-201ENST00000616345 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.2-201ENST00000616535 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.3-201ENST00000617785 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.19-201ENST00000618602 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 RNU2-1-201ENST00000618664 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.6-201ENST00000619225 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.5-201ENST00000619465 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 U2.10-201ENST00000620268 191 ntBASIC5.88□□□□□ -1.47
HDGFP51858 AC138965.3-201ENST00000623875 498 ntBASIC5.88□□□□□ -1.47
HDGFP51858 snoU18.1-201ENST00000629629 71 ntBASIC5.88□□□□□ -1.47
HDGFP51858 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.88□□□□□ -1.47
HDGFP51858 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.88□□□□□ -1.47
HDGFP51858 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.88□□□□□ -1.47
HDGFP51858 AC073136.1-201ENST00000449426 2884 ntBASIC5.88□□□□□ -1.47
HDGFP51858 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.88□□□□□ -1.47
HDGFP51858 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDGFP51858 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.87□□□□□ -1.47
HDGFP51858 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDGFP51858 AC125336.1-201ENST00000508893 2827 ntBASIC5.87□□□□□ -1.47
HDGFP51858 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HDGFP51858 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HDGFP51858 RNU6-961P-201ENST00000363893 105 ntBASIC5.87□□□□□ -1.47
HDGFP51858 SNORD14B-201ENST00000364533 90 ntBASIC5.87□□□□□ -1.47
HDGFP51858 RNU4-9P-201ENST00000364951 139 ntBASIC5.87□□□□□ -1.47
HDGFP51858 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.87□□□□□ -1.47
HDGFP51858 AC011742.1-201ENST00000431448 434 ntBASIC5.87□□□□□ -1.47
HDGFP51858 AP000870.1-201ENST00000472927 406 ntBASIC5.87□□□□□ -1.47
HDGFP51858 RNA5SP170-201ENST00000517150 101 ntBASIC5.87□□□□□ -1.47
HDGFP51858 SUMO2P18-201ENST00000518873 252 ntBASIC5.87□□□□□ -1.47
HDGFP51858 AC026403.1-201ENST00000518938 295 ntBASIC5.87□□□□□ -1.47
HDGFP51858 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.87□□□□□ -1.47
HDGFP51858 AL358913.1-201ENST00000554342 121 ntBASIC5.87□□□□□ -1.47
HDGFP51858 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.87□□□□□ -1.47
HDGFP51858 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDGFP51858 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HDGFP51858 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HDGFP51858 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HDGFP51858 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HDGFP51858 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HDGFP51858 RNU6-1175P-201ENST00000365200 107 ntBASIC5.86□□□□□ -1.47
HDGFP51858 Y_RNA.357-201ENST00000365487 109 ntBASIC5.86□□□□□ -1.47
HDGFP51858 RNU6-211P-201ENST00000384047 107 ntBASIC5.86□□□□□ -1.47
HDGFP51858 SNORA36C-201ENST00000384289 132 ntBASIC5.86□□□□□ -1.47
HDGFP51858 MIR30B-201ENST00000384850 88 ntBASIC5.86□□□□□ -1.47
HDGFP51858 SNORA46.1-201ENST00000391069 153 ntBASIC5.86□□□□□ -1.47
HDGFP51858 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.86□□□□□ -1.47
HDGFP51858 OR2AH1P-201ENST00000425717 928 ntBASIC5.86□□□□□ -1.47
HDGFP51858 AC117440.1-201ENST00000474107 571 ntBASIC5.86□□□□□ -1.47
HDGFP51858 SNORA72.7-201ENST00000516349 94 ntBASIC5.86□□□□□ -1.47
HDGFP51858 RNU6-567P-201ENST00000516746 107 ntBASIC5.86□□□□□ -1.47
HDGFP51858 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.86□□□□□ -1.47
HDGFP51858 HMGN2P47-201ENST00000559378 272 ntBASIC5.86□□□□□ -1.47
HDGFP51858 MIR6868-201ENST00000611215 58 ntBASIC5.86□□□□□ -1.47
HDGFP51858 AL391261.4-201ENST00000616012 481 ntBASIC5.86□□□□□ -1.47
HDGFP51858 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.86□□□□□ -1.47
HDGFP51858 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HDGFP51858 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HDGFP51858 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HDGFP51858 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.86□□□□□ -1.47
HDGFP51858 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HDGFP51858 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.85□□□□□ -1.47
HDGFP51858 MIR412-201ENST00000362142 91 ntBASIC5.85□□□□□ -1.47
HDGFP51858 Y_RNA.238-201ENST00000364441 102 ntBASIC5.85□□□□□ -1.47
HDGFP51858 SNORA3.3-201ENST00000408712 125 ntBASIC5.85□□□□□ -1.47
HDGFP51858 RNU6-712P-201ENST00000410558 100 ntBASIC5.85□□□□□ -1.47
HDGFP51858 RNU6-603P-201ENST00000411403 107 ntBASIC5.85□□□□□ -1.47
HDGFP51858 POLR2KP2-201ENST00000438155 177 ntBASIC5.85□□□□□ -1.47
HDGFP51858 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.85□□□□□ -1.47
HDGFP51858 RNU6-1211P-201ENST00000459179 105 ntBASIC5.85□□□□□ -1.47
HDGFP51858 RNU1-95P-201ENST00000516357 160 ntBASIC5.85□□□□□ -1.47
HDGFP51858 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.85□□□□□ -1.47
HDGFP51858 RNU1-128P-201ENST00000516704 160 ntBASIC5.85□□□□□ -1.47
HDGFP51858 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.85□□□□□ -1.47
HDGFP51858 TGIF1P1-201ENST00000558095 802 ntBASIC5.85□□□□□ -1.47
HDGFP51858 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.85□□□□□ -1.47
HDGFP51858 AC007179.3-201ENST00000604976 235 ntBASIC5.85□□□□□ -1.47
HDGFP51858 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.85□□□□□ -1.47
HDGFP51858 AC116447.1-201ENST00000613153 453 ntBASIC5.85□□□□□ -1.47
HDGFP51858 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.85□□□□□ -1.47
HDGFP51858 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.85□□□□□ -1.47
HDGFP51858 AC006001.4-201ENST00000622243 395 ntBASIC5.85□□□□□ -1.47
HDGFP51858 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.85□□□□□ -1.47
HDGFP51858 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HDGFP51858 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HDGFP51858 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HDGFP51858 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.84□□□□□ -1.47
HDGFP51858 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.84□□□□□ -1.47
HDGFP51858 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
HDGFP51858 AC009229.4-201ENST00000623854 1947 ntBASIC5.84□□□□□ -1.47
HDGFP51858 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.84□□□□□ -1.47
HDGFP51858 RNU5B-2P-201ENST00000363036 113 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms