Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.79□□□□□ -2.12
CXCL12P48061 AL355598.1-201ENST00000604169 202 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 Z99289.3-201ENST00000605586 594 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC138749.5-201ENST00000611461 208 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AL365204.3-201ENST00000612448 685 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC005332.10-201ENST00000612725 619 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC116165.2-201ENST00000616705 206 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 FRG1KP-201ENST00000623592 341 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 MTND5P42-201ENST00000637720 498 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL12P48061 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL12P48061 SNORA4.3-201ENST00000365564 137 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL12P48061 AL031577.2-201ENST00000404133 280 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL12P48061 MTND4P20-201ENST00000424125 869 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AL589872.1-201ENST00000426602 288 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 WARS2P1-201ENST00000429678 537 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AL591212.2-201ENST00000433923 257 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL12P48061 UBE2D3P4-201ENST00000441973 436 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL12P48061 USP9YP12-201ENST00000450481 570 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AL133217.1-201ENST00000450980 425 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC093899.1-201ENST00000457984 376 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AL139824.2-201ENST00000458731 1095 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.78□□□□□ -2.12
CXCL12P48061 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL12P48061 AC010587.1-201ENST00000505809 469 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 RNU6-143P-201ENST00000516942 93 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL12P48061 AC009902.1-201ENST00000519351 183 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.78□□□□□ -2.12
CXCL12P48061 AC084851.1-201ENST00000529105 249 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.78□□□□□ -2.12
CXCL12P48061 AL121821.2-201ENST00000556081 394 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC007151.1-201ENST00000572774 483 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 MIR3167-201ENST00000579623 85 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL12P48061 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL12P48061 HMGN1P30-201ENST00000589286 268 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL12P48061 AL391813.1-201ENST00000603098 260 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AL359999.1-201ENST00000604513 294 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 RNU6-87P-201ENST00000607561 108 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC022893.3-201ENST00000607665 437 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC011939.3-201ENST00000613686 466 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC009090.3-201ENST00000616553 565 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AL449363.1-201ENST00000617815 186 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC009878.1-201ENST00000621819 340 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AF246928.1-201ENST00000623768 87 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL12P48061 U6.99-201ENST00000637524 83 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
CXCL12P48061 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL12P48061 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CXCL12P48061 AL109809.4-201ENST00000603520 2185 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CXCL12P48061 SNORD56.2-201ENST00000363242 71 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 Y_RNA.116-201ENST00000363292 103 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU6-960P-201ENST00000364056 120 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU1-57P-201ENST00000384491 166 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 Y_RNA.534-201ENST00000384599 112 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 OR51A5P-201ENST00000415429 942 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 Z99497.1-201ENST00000421282 135 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.77□□□□□ -2.13
CXCL12P48061 AL358453.1-201ENST00000422522 250 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC007560.1-201ENST00000426912 237 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.77□□□□□ -2.13
CXCL12P48061 AL645568.3-201ENST00000433683 316 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AL161651.1-201ENST00000440882 223 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 GPM6BP3-201ENST00000442797 145 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 PSPHP1-201ENST00000450062 261 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 ART2BP-201ENST00000453501 499 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU7-95P-201ENST00000459222 64 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.77□□□□□ -2.13
CXCL12P48061 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.77□□□□□ -2.13
CXCL12P48061 AC022447.1-201ENST00000515358 464 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNA5SP445-201ENST00000515889 115 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU6-581P-201ENST00000516214 105 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU6-914P-201ENST00000516749 109 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU6-677P-201ENST00000516914 101 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 RNU6-1183P-201ENST00000517054 60 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC106038.2-201ENST00000520706 568 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC025755.1-201ENST00000521306 278 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.77□□□□□ -2.13
CXCL12P48061 AC011979.2-201ENST00000527568 352 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 CYCSP26-201ENST00000534107 320 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.77□□□□□ -2.13
CXCL12P48061 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.77□□□□□ -2.13
CXCL12P48061 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.77□□□□□ -2.13
CXCL12P48061 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.77□□□□□ -2.13
CXCL12P48061 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.77□□□□□ -2.13
CXCL12P48061 AL138976.2-201ENST00000563989 694 ntBASIC1.77□□□□□ -2.13
CXCL12P48061 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.77□□□□□ -2.13
CXCL12P48061 AC109446.2-201ENST00000567872 497 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms