Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNU6-384P-201ENST00000364900 104 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 SNORA9.2-201ENST00000365361 133 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 RNU6-198P-201ENST00000384258 104 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 MIR491-201ENST00000384877 84 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 MIR34A-201ENST00000385130 110 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AL138885.1-201ENST00000405921 675 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 RPS4XP7-201ENST00000406274 780 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN9P43378 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN9P43378 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN9P43378 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPN9P43378 AC007560.1-201ENST00000426912 237 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 RPL21P40-201ENST00000428586 483 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPN9P43378 AC098831.1-201ENST00000440661 216 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 MTND5P20-201ENST00000448677 143 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPN9P43378 AL583843.1-201ENST00000456070 346 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 RNU7-66P-201ENST00000459469 62 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 RPS27AP10-201ENST00000496103 208 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AC114786.4-201ENST00000508771 728 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 SNORA19.2-201ENST00000516013 114 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 BTF3P12-201ENST00000519620 469 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AC090136.1-201ENST00000520009 240 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN9P43378 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPN9P43378 CYCSP39-201ENST00000565821 309 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 AC010653.1-201ENST00000571108 881 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 MIR4325-201ENST00000583049 90 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN9P43378 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN9P43378 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PTPN9P43378 AC110491.1-201ENST00000562191 2010 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 RNU6-266P-201ENST00000364225 107 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 Y_RNA.414-201ENST00000384011 101 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 RNU6-767P-201ENST00000384132 107 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 RNA5SP252-201ENST00000391131 119 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN9P43378 RAP1BP3-201ENST00000407180 549 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 Y_RNA.604-201ENST00000410574 102 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.06□□□□□ -1.92
PTPN9P43378 BPY2DP-201ENST00000422208 265 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 MTND5P19-201ENST00000424872 1794 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 RPL23AP83-201ENST00000434984 473 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 PMCHL2-203ENST00000457791 237 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.06□□□□□ -1.92
PTPN9P43378 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.06□□□□□ -1.92
PTPN9P43378 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.06□□□□□ -1.92
PTPN9P43378 AC087241.2-201ENST00000535801 324 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
PTPN9P43378 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.06□□□□□ -1.92
PTPN9P43378 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PTPN9P43378 AL161756.2-201ENST00000604597 246 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 AC021646.1-201ENST00000605469 484 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 AC087045.1-201ENST00000605856 382 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 AL627309.6-201ENST00000606857 840 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 U6.99-201ENST00000637524 83 ntBASIC3.06□□□□□ -1.92
PTPN9P43378 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPN9P43378 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN9P43378 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN9P43378 RNU6-845P-201ENST00000362578 103 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 Y_RNA.324-201ENST00000365165 102 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 Y_RNA.373-201ENST00000365600 103 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 RNU6-851P-201ENST00000384565 107 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 RNU6-658P-201ENST00000384606 106 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 RNU6-1148P-201ENST00000410992 104 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN9P43378 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN9P43378 AC244505.4-201ENST00000434905 287 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 SSXP5-201ENST00000443473 287 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 RPL7P12-201ENST00000446719 750 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN9P43378 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN9P43378 AC083904.1-201ENST00000487828 231 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 RNA5SP341-201ENST00000516261 117 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 RN7SKP256-201ENST00000517201 314 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.05□□□□□ -1.92
PTPN9P43378 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.05□□□□□ -1.92
PTPN9P43378 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN9P43378 LINC00933-203ENST00000559812 219 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.05□□□□□ -1.92
PTPN9P43378 UBE2V2P2-201ENST00000587677 504 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AL022345.1-201ENST00000607292 135 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AC004852.3-201ENST00000614131 326 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AC093913.1-201ENST00000614178 329 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 MIR6134-201ENST00000617606 109 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AC009248.2-201ENST00000619826 254 ntBASIC3.05□□□□□ -1.92
PTPN9P43378 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.05□□□□□ -1.92
PTPN9P43378 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN9P43378 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPN9P43378 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms