Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
HTTP42858 AC011406.1-201ENST00000512440 370 ntBASIC0.05□□□□□ -2.4
HTTP42858 MIR3126-201ENST00000577443 74 ntBASIC0.05□□□□□ -2.4
HTTP42858 AC025449.1-201ENST00000603896 529 ntBASIC0.05□□□□□ -2.4
HTTP42858 AC006963.1-201ENST00000624003 1052 ntBASIC0.05□□□□□ -2.4
HTTP42858 CR381572.1-201ENST00000625098 102 ntBASIC0.05□□□□□ -2.4
HTTP42858 RNU4-12P-201ENST00000365233 139 ntBASIC0.04□□□□□ -2.4
HTTP42858 Y_RNA.468-201ENST00000384298 102 ntBASIC0.04□□□□□ -2.4
HTTP42858 MIR605-201ENST00000385078 83 ntBASIC0.04□□□□□ -2.4
HTTP42858 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 AC108729.1-201ENST00000487812 947 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC147055.4-201ENST00000504399 745 ntBASIC0.04□□□□□ -2.4
HTTP42858 RNU6-491P-201ENST00000516099 110 ntBASIC0.04□□□□□ -2.4
HTTP42858 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
HTTP42858 MED28P6-201ENST00000558776 231 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.04□□□□□ -2.4
HTTP42858 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.04□□□□□ -2.4
HTTP42858 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.04□□□□□ -2.4
HTTP42858 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HTTP42858 BPY2DP-201ENST00000422208 265 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.04□□□□□ -2.4
HTTP42858 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 AC013267.1-201ENST00000458227 267 ntBASIC0.04□□□□□ -2.4
HTTP42858 CENPUP1-201ENST00000526649 1202 ntBASIC0.04□□□□□ -2.4
HTTP42858 AP003034.1-201ENST00000534621 422 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC018659.1-201ENST00000551083 169 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC105148.1-201ENST00000604961 409 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC010738.1-201ENST00000604970 987 ntBASIC0.04□□□□□ -2.4
HTTP42858 AL353149.1-201ENST00000610667 244 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.04□□□□□ -2.4
HTTP42858 AC099842.1-201ENST00000619919 596 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
HTTP42858 AP003399.1-201ENST00000637534 361 ntBASIC0.04□□□□□ -2.4
HTTP42858 FARSBP1-201ENST00000435808 1778 ntBASIC0.04□□□□□ -2.4
HTTP42858 SNORD115-3-201ENST00000363100 82 ntBASIC0.04□□□□□ -2.4
HTTP42858 Y_RNA.203-201ENST00000364106 102 ntBASIC0.04□□□□□ -2.4
HTTP42858 RNU4-78P-201ENST00000410940 126 ntBASIC0.04□□□□□ -2.4
HTTP42858 RPS24P7-201ENST00000416921 246 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 PNPLA4P1-201ENST00000458328 305 ntBASIC0.04□□□□□ -2.4
HTTP42858 AL049874.1-201ENST00000489560 388 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 RNU6-567P-201ENST00000516746 107 ntBASIC0.04□□□□□ -2.4
HTTP42858 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.04□□□□□ -2.4
HTTP42858 AC104417.1-201ENST00000523974 751 ntBASIC0.04□□□□□ -2.4
HTTP42858 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
HTTP42858 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
HTTP42858 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.03□□□□□ -2.4
HTTP42858 RNU1-119P-201ENST00000391122 165 ntBASIC0.03□□□□□ -2.4
HTTP42858 PDCL2P1-201ENST00000419302 352 ntBASIC0.03□□□□□ -2.4
HTTP42858 MTND4LP11-201ENST00000422184 280 ntBASIC0.03□□□□□ -2.4
HTTP42858 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.03□□□□□ -2.4
HTTP42858 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.03□□□□□ -2.4
HTTP42858 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.03□□□□□ -2.4
HTTP42858 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
HTTP42858 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.03□□□□□ -2.4
HTTP42858 AL713866.2-201ENST00000603579 219 ntBASIC0.03□□□□□ -2.4
HTTP42858 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
HTTP42858 AL022345.2-201ENST00000606307 135 ntBASIC0.03□□□□□ -2.4
HTTP42858 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
HTTP42858 MTND4P11-201ENST00000417020 1058 ntBASIC0.03□□□□□ -2.4
HTTP42858 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.03□□□□□ -2.4
HTTP42858 RNU6-902P-201ENST00000517212 91 ntBASIC0.03□□□□□ -2.4
HTTP42858 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.03□□□□□ -2.4
HTTP42858 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.03□□□□□ -2.4
HTTP42858 MIR4431-201ENST00000579990 94 ntBASIC0.03□□□□□ -2.4
HTTP42858 MIR8074-201ENST00000615081 81 ntBASIC0.03□□□□□ -2.4
HTTP42858 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.03□□□□□ -2.4
HTTP42858 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
HTTP42858 MIR424-201ENST00000362227 98 ntBASIC0.02□□□□□ -2.41
HTTP42858 RNU4-32P-201ENST00000363404 141 ntBASIC0.02□□□□□ -2.41
HTTP42858 RNA5SP205-201ENST00000364653 136 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC007742.1-201ENST00000425789 329 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.02□□□□□ -2.41
HTTP42858 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.02□□□□□ -2.41
HTTP42858 ELOCP26-201ENST00000436067 329 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC244505.3-201ENST00000454598 187 ntBASIC0.02□□□□□ -2.41
HTTP42858 RNU7-27P-201ENST00000459281 62 ntBASIC0.02□□□□□ -2.41
HTTP42858 RPL7P43-201ENST00000478876 753 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC016065.2-201ENST00000514530 444 ntBASIC0.02□□□□□ -2.41
HTTP42858 AP003973.1-201ENST00000604639 691 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC017083.3-201ENST00000609955 700 ntBASIC0.02□□□□□ -2.41
HTTP42858 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
HTTP42858 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC092125.1-201ENST00000562568 1995 ntBASIC0.02□□□□□ -2.41
HTTP42858 AL513185.3-201ENST00000433335 1300 ntBASIC0.02□□□□□ -2.41
HTTP42858 RNA5SP240-201ENST00000365355 128 ntBASIC0.02□□□□□ -2.41
HTTP42858 RNU6-26P-201ENST00000383985 107 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC098592.2-201ENST00000413158 265 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC104651.1-201ENST00000427559 735 ntBASIC0.02□□□□□ -2.41
HTTP42858 AL135790.2-201ENST00000437701 267 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC092757.1-201ENST00000467293 467 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.02□□□□□ -2.41
HTTP42858 RNU4-54P-201ENST00000516428 129 ntBASIC0.02□□□□□ -2.41
HTTP42858 OR5AK1P-201ENST00000524837 922 ntBASIC0.02□□□□□ -2.41
HTTP42858 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.02□□□□□ -2.41
HTTP42858 BNIP3P25-201ENST00000596023 559 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms