Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AC138393.1-203ENST00000327086 343 ntBASIC3.19□□□□□ -1.9
THBS4P35443 Y_RNA.145-201ENST00000363527 102 ntBASIC3.19□□□□□ -1.9
THBS4P35443 RNA5SP51-201ENST00000364750 119 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC117470.1-201ENST00000381974 330 ntBASIC3.19□□□□□ -1.9
THBS4P35443 MIR184-201ENST00000384962 84 ntBASIC3.19□□□□□ -1.9
THBS4P35443 MIR518D-201ENST00000385014 87 ntBASIC3.19□□□□□ -1.9
THBS4P35443 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
THBS4P35443 RNA5SP31-201ENST00000411144 127 ntBASIC3.19□□□□□ -1.9
THBS4P35443 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.19□□□□□ -1.9
THBS4P35443 PGBD4P6-201ENST00000421501 610 ntBASIC3.19□□□□□ -1.9
THBS4P35443 BPY2DP-201ENST00000422208 265 ntBASIC3.19□□□□□ -1.9
THBS4P35443 TOMM20P4-201ENST00000427861 435 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
THBS4P35443 CYCSP32-201ENST00000440548 321 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC098831.1-201ENST00000440661 216 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.19□□□□□ -1.9
THBS4P35443 AC128713.1-201ENST00000471495 306 ntBASIC3.19□□□□□ -1.9
THBS4P35443 SLC25A15P5-201ENST00000508033 253 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.19□□□□□ -1.9
THBS4P35443 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.19□□□□□ -1.9
THBS4P35443 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.19□□□□□ -1.9
THBS4P35443 NACAP3-201ENST00000552100 481 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.19□□□□□ -1.9
THBS4P35443 HMGN2P15-201ENST00000585707 270 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.19□□□□□ -1.9
THBS4P35443 AC018462.2-201ENST00000605375 395 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC123912.5-201ENST00000605470 343 ntBASIC3.19□□□□□ -1.9
THBS4P35443 RNU6-85P-201ENST00000605989 107 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AC116312.1-201ENST00000606841 314 ntBASIC3.19□□□□□ -1.9
THBS4P35443 MIR92B-201ENST00000607575 96 ntBASIC3.19□□□□□ -1.9
THBS4P35443 AL161423.1-201ENST00000613700 262 ntBASIC3.19□□□□□ -1.9
THBS4P35443 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.19□□□□□ -1.9
THBS4P35443 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.19□□□□□ -1.9
THBS4P35443 uc_338.22-201ENST00000622722 187 ntBASIC3.19□□□□□ -1.9
THBS4P35443 Z69720.2-201ENST00000624755 279 ntBASIC3.19□□□□□ -1.9
THBS4P35443 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.19□□□□□ -1.9
THBS4P35443 AP000553.6-201ENST00000641242 118 ntBASIC3.19□□□□□ -1.9
THBS4P35443 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.19□□□□□ -1.9
THBS4P35443 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
THBS4P35443 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
THBS4P35443 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
THBS4P35443 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
THBS4P35443 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
THBS4P35443 MFSD8-236ENST00000641509 4050 ntBASIC3.19□□□□□ -1.9
THBS4P35443 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
THBS4P35443 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
THBS4P35443 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
THBS4P35443 SNORA63C-201ENST00000364578 129 ntBASIC3.18□□□□□ -1.9
THBS4P35443 RNU6-890P-201ENST00000384121 107 ntBASIC3.18□□□□□ -1.9
THBS4P35443 Y_RNA.594-201ENST00000410373 140 ntBASIC3.18□□□□□ -1.9
THBS4P35443 RNU6-1050P-201ENST00000410388 107 ntBASIC3.18□□□□□ -1.9
THBS4P35443 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.18□□□□□ -1.9
THBS4P35443 AL159987.2-201ENST00000432754 307 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC236972.1-201ENST00000433225 199 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.18□□□□□ -1.9
THBS4P35443 RNU7-23P-201ENST00000459465 62 ntBASIC3.18□□□□□ -1.9
THBS4P35443 HMGN2P13-201ENST00000476476 274 ntBASIC3.18□□□□□ -1.9
THBS4P35443 RPL7P42-201ENST00000481005 679 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC097473.1-201ENST00000508142 408 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC104619.4-201ENST00000510773 249 ntBASIC3.18□□□□□ -1.9
THBS4P35443 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
THBS4P35443 RNU6-307P-201ENST00000516743 106 ntBASIC3.18□□□□□ -1.9
THBS4P35443 RN7SKP295-201ENST00000517264 153 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC104576.1-201ENST00000524225 88 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC008011.1-201ENST00000545989 227 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.18□□□□□ -1.9
THBS4P35443 LINC00933-203ENST00000559812 219 ntBASIC3.18□□□□□ -1.9
THBS4P35443 MIR4738-201ENST00000579134 87 ntBASIC3.18□□□□□ -1.9
THBS4P35443 OR1M4P-201ENST00000589199 287 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.18□□□□□ -1.9
THBS4P35443 AC119674.1-207ENST00000641355 633 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC110491.1-201ENST00000562191 2010 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
THBS4P35443 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
THBS4P35443 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
THBS4P35443 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
THBS4P35443 AL021368.2-201ENST00000606125 5352 ntBASIC3.17□□□□□ -1.9
THBS4P35443 AL079305.1-201ENST00000623159 3008 ntBASIC3.17□□□□□ -1.9
THBS4P35443 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
THBS4P35443 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
THBS4P35443 Y_RNA.28-201ENST00000362554 111 ntBASIC3.17□□□□□ -1.9
THBS4P35443 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.17□□□□□ -1.9
THBS4P35443 RNU6-72P-201ENST00000384285 79 ntBASIC3.17□□□□□ -1.9
THBS4P35443 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
THBS4P35443 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.17□□□□□ -1.9
THBS4P35443 AC017079.2-201ENST00000416102 485 ntBASIC3.17□□□□□ -1.9
THBS4P35443 AL096701.2-201ENST00000416920 238 ntBASIC3.17□□□□□ -1.9
THBS4P35443 PMCHL1-202ENST00000423102 261 ntBASIC3.17□□□□□ -1.9
THBS4P35443 USMG5P1-201ENST00000425964 177 ntBASIC3.17□□□□□ -1.9
THBS4P35443 AC097713.2-201ENST00000430199 356 ntBASIC3.17□□□□□ -1.9
THBS4P35443 RPL23AP50-201ENST00000434149 455 ntBASIC3.17□□□□□ -1.9
THBS4P35443 AL137792.2-201ENST00000443484 235 ntBASIC3.17□□□□□ -1.9
THBS4P35443 RPS3AP46-201ENST00000448352 682 ntBASIC3.17□□□□□ -1.9
THBS4P35443 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.17□□□□□ -1.9
THBS4P35443 AC018437.1-201ENST00000492214 406 ntBASIC3.17□□□□□ -1.9
THBS4P35443 RN7SKP18-201ENST00000516005 275 ntBASIC3.17□□□□□ -1.9
THBS4P35443 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
THBS4P35443 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.17□□□□□ -1.9
THBS4P35443 AC026403.1-201ENST00000518938 295 ntBASIC3.17□□□□□ -1.9
THBS4P35443 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms