Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC244505.3-201ENST00000454598 187 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.32□□□□□ -2.36
CLIP1P30622 AC121161.1-201ENST00000510606 652 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.32□□□□□ -2.36
CLIP1P30622 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.32□□□□□ -2.36
CLIP1P30622 AC015688.2-201ENST00000584523 262 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.32□□□□□ -2.36
CLIP1P30622 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.32□□□□□ -2.36
CLIP1P30622 AC080013.4-201ENST00000607624 649 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 MIR5739-201ENST00000619803 80 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.32□□□□□ -2.36
CLIP1P30622 MIR8065-201ENST00000620577 100 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 MIR338-201ENST00000636369 67 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.32□□□□□ -2.36
CLIP1P30622 GDI2P1-201ENST00000429312 1336 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 RNU6-486P-201ENST00000363116 107 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 SNORD1A-201ENST00000364968 72 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 RNU6-441P-201ENST00000384545 106 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 AL591034.2-201ENST00000402839 359 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 AL355615.1-201ENST00000406187 641 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 RNA5SP100-201ENST00000410903 110 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 RNA5SP59-201ENST00000410922 110 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 AC010099.3-201ENST00000423896 409 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.31□□□□□ -2.36
CLIP1P30622 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.31□□□□□ -2.36
CLIP1P30622 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.31□□□□□ -2.36
CLIP1P30622 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.31□□□□□ -2.36
CLIP1P30622 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.31□□□□□ -2.36
CLIP1P30622 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.31□□□□□ -2.36
CLIP1P30622 RNU6-27P-201ENST00000516146 107 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 AC022616.2-201ENST00000523185 300 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 OR5AK1P-201ENST00000524837 922 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 DUXAP1-201ENST00000556632 463 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 CYP3A52P-201ENST00000563326 91 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 AC069304.2-201ENST00000605154 435 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.31□□□□□ -2.36
CLIP1P30622 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CLIP1P30622 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
CLIP1P30622 RNU6-251P-201ENST00000363235 104 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 Y_RNA.476-201ENST00000384347 108 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AC010385.1-201ENST00000412374 256 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.3□□□□□ -2.36
CLIP1P30622 BTF3P8-201ENST00000414577 526 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 PNRC2P1-201ENST00000423940 420 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.3□□□□□ -2.36
CLIP1P30622 RPL26P6-201ENST00000440913 438 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.3□□□□□ -2.36
CLIP1P30622 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.3□□□□□ -2.36
CLIP1P30622 AC006512.1-201ENST00000468816 291 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 RNU6-197P-201ENST00000516680 100 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 COPS8P3-201ENST00000526024 482 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AL022345.2-201ENST00000606307 135 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.3□□□□□ -2.36
CLIP1P30622 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.3□□□□□ -2.36
CLIP1P30622 AL359854.1-201ENST00000614203 1594 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 MIR302D-201ENST00000362275 68 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 RNU6-884P-201ENST00000363889 107 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 C1DP1-201ENST00000426049 402 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.3□□□□□ -2.36
CLIP1P30622 AL161788.1-201ENST00000441805 169 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CLIP1P30622 VPS26AP1-201ENST00000483197 979 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.3□□□□□ -2.36
CLIP1P30622 SNORA25.11-201ENST00000515935 105 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 RNU6-1256P-201ENST00000516539 103 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.3□□□□□ -2.36
CLIP1P30622 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.3□□□□□ -2.36
CLIP1P30622 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.3□□□□□ -2.36
CLIP1P30622 SNORA77B-201ENST00000578179 125 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.3□□□□□ -2.36
CLIP1P30622 BNIP3P27-201ENST00000599991 412 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 AC010738.1-201ENST00000604970 987 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 MIR8063-201ENST00000621930 81 ntBASIC0.3□□□□□ -2.36
CLIP1P30622 SNORD18A-201ENST00000363753 72 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CLIP1P30622 MIR561-201ENST00000385216 97 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.29□□□□□ -2.36
CLIP1P30622 AL163195.1-201ENST00000496941 348 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.29□□□□□ -2.36
CLIP1P30622 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.29□□□□□ -2.36
CLIP1P30622 AC025465.3-201ENST00000510570 311 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 NRON-201ENST00000517270 370 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 C1DP5-201ENST00000525775 383 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 CYCSP27-201ENST00000527643 293 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 AC005261.5-201ENST00000596280 355 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 SNRPGP17-201ENST00000603780 214 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 AP000238.1-201ENST00000608759 426 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 AC027335.2-201ENST00000624030 375 ntBASIC0.29□□□□□ -2.36
CLIP1P30622 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 RNU6-348P-201ENST00000384386 107 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 MIR95-201ENST00000385072 81 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.28□□□□□ -2.37
CLIP1P30622 BPY2DP-201ENST00000422208 265 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 AL590383.1-201ENST00000428602 75 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 AC027119.1-201ENST00000440877 241 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms