Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
ABCD3P28288 Y_RNA.89-201ENST00000363031 102 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 SNORA7.4-201ENST00000384249 137 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 SNORD115-47-201ENST00000391226 86 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 RNU6-373P-201ENST00000411247 98 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.9□□□□□ -1.95
ABCD3P28288 AC104332.2-201ENST00000429959 156 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.9□□□□□ -1.95
ABCD3P28288 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.9□□□□□ -1.95
ABCD3P28288 AL121769.1-201ENST00000469473 401 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.9□□□□□ -1.95
ABCD3P28288 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.9□□□□□ -1.95
ABCD3P28288 RNU1-143P-201ENST00000516296 146 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.9□□□□□ -1.95
ABCD3P28288 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.9□□□□□ -1.95
ABCD3P28288 AL118558.2-201ENST00000556294 238 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.9□□□□□ -1.95
ABCD3P28288 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.9□□□□□ -1.95
ABCD3P28288 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.9□□□□□ -1.95
ABCD3P28288 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.9□□□□□ -1.95
ABCD3P28288 AC010525.2-201ENST00000590920 195 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.9□□□□□ -1.95
ABCD3P28288 RNU6-89P-201ENST00000606519 100 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 AC092807.2-201ENST00000609367 243 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 U1.23-201ENST00000610293 146 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 AL591516.1-201ENST00000611326 274 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 RNU1-68P-201ENST00000615382 146 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 U1.39-201ENST00000621562 146 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.9□□□□□ -1.95
ABCD3P28288 U4.7-201ENST00000638126 106 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
ABCD3P28288 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
ABCD3P28288 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.9□□□□□ -1.95
ABCD3P28288 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
ABCD3P28288 AC121333.1-201ENST00000567488 2709 ntBASIC2.9□□□□□ -1.95
ABCD3P28288 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
ABCD3P28288 RNU6-486P-201ENST00000363116 107 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 RNU6-461P-201ENST00000364195 107 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 Y_RNA.378-201ENST00000365652 113 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 RNA5SP118-201ENST00000410385 109 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 Y_RNA.599-201ENST00000410489 109 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.89□□□□□ -1.95
ABCD3P28288 RPS3AP44-201ENST00000425466 790 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 SRIP2-201ENST00000428470 166 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.89□□□□□ -1.95
ABCD3P28288 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.89□□□□□ -1.95
ABCD3P28288 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ABCD3P28288 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.89□□□□□ -1.95
ABCD3P28288 AC018437.1-201ENST00000492214 406 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.89□□□□□ -1.95
ABCD3P28288 MTCYBP40-201ENST00000509390 1135 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 RNA5SP217-201ENST00000515959 91 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 AP003033.1-201ENST00000527244 415 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 AC078814.3-201ENST00000553036 491 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 UBL5P2-201ENST00000583788 219 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.89□□□□□ -1.95
ABCD3P28288 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.89□□□□□ -1.95
ABCD3P28288 AC146944.4-201ENST00000602697 718 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 APOOP1-201ENST00000604695 592 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 ATP1B3P1-201ENST00000605365 821 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 AC021646.1-201ENST00000605469 484 ntBASIC2.89□□□□□ -1.95
ABCD3P28288 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.89□□□□□ -1.95
ABCD3P28288 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.89□□□□□ -1.95
ABCD3P28288 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ABCD3P28288 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ABCD3P28288 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.89□□□□□ -1.95
ABCD3P28288 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
ABCD3P28288 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.89□□□□□ -1.95
ABCD3P28288 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCD3P28288 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCD3P28288 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ABCD3P28288 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-37P-201ENST00000362692 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-11P-201ENST00000364234 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-7-201ENST00000364784 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-534P-201ENST00000364877 106 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-8-201ENST00000365467 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 SET-203ENST00000372688 801 ntTSL 2 BASIC2.88□□□□□ -1.95
ABCD3P28288 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-25P-201ENST00000383873 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-1-201ENST00000383898 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-48P-201ENST00000384161 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-36P-201ENST00000384172 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-4P-201ENST00000384205 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-5P-201ENST00000384238 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-3P-201ENST00000384314 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-16P-201ENST00000384385 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-15P-201ENST00000384534 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-2-201ENST00000384627 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-29P-201ENST00000384637 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 SNORD15B-201ENST00000384714 146 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-9-201ENST00000384776 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU6-33P-201ENST00000384793 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 MIR1277-201ENST00000408536 78 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RNU4-26P-201ENST00000410270 107 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 RPL32P35-201ENST00000415214 394 ntBASIC2.88□□□□□ -1.95
ABCD3P28288 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms