Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC112204.1-201ENST00000502591 103 ntBASIC1.7□□□□□ -2.14
USF1P22415 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.7□□□□□ -2.14
USF1P22415 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.7□□□□□ -2.14
USF1P22415 RNU7-51P-201ENST00000516560 62 ntBASIC1.7□□□□□ -2.14
USF1P22415 MTND4LP18-201ENST00000526864 291 ntBASIC1.7□□□□□ -2.14
USF1P22415 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.7□□□□□ -2.14
USF1P22415 AP003122.4-201ENST00000530980 758 ntBASIC1.7□□□□□ -2.14
USF1P22415 AC136619.2-201ENST00000563361 631 ntBASIC1.7□□□□□ -2.14
USF1P22415 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
USF1P22415 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.7□□□□□ -2.14
USF1P22415 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.7□□□□□ -2.14
USF1P22415 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
USF1P22415 AC018638.7-201ENST00000605836 1114 ntBASIC1.7□□□□□ -2.14
USF1P22415 TUSC7.1-201ENST00000610969 165 ntBASIC1.7□□□□□ -2.14
USF1P22415 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.7□□□□□ -2.14
USF1P22415 Y_RNA.783-201ENST00000613546 102 ntBASIC1.7□□□□□ -2.14
USF1P22415 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.7□□□□□ -2.14
USF1P22415 uc_338.20-201ENST00000621563 178 ntBASIC1.7□□□□□ -2.14
USF1P22415 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
USF1P22415 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.7□□□□□ -2.14
USF1P22415 OR4G3P-201ENST00000633500 913 ntBASIC1.7□□□□□ -2.14
USF1P22415 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USF1P22415 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
USF1P22415 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
USF1P22415 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
USF1P22415 SNORA25B-201ENST00000365507 128 ntBASIC1.69□□□□□ -2.14
USF1P22415 RPS15AP12-201ENST00000419498 388 ntBASIC1.69□□□□□ -2.14
USF1P22415 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.69□□□□□ -2.14
USF1P22415 RPL23AP30-201ENST00000432419 501 ntBASIC1.69□□□□□ -2.14
USF1P22415 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.69□□□□□ -2.14
USF1P22415 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.69□□□□□ -2.14
USF1P22415 RPL23AP7-203ENST00000449021 469 ntBASIC1.69□□□□□ -2.14
USF1P22415 AL021397.1-201ENST00000451806 248 ntBASIC1.69□□□□□ -2.14
USF1P22415 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.69□□□□□ -2.14
USF1P22415 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.69□□□□□ -2.14
USF1P22415 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.69□□□□□ -2.14
USF1P22415 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.69□□□□□ -2.14
USF1P22415 ZNF519P3-201ENST00000557158 1032 ntBASIC1.69□□□□□ -2.14
USF1P22415 AC092325.1-201ENST00000566449 554 ntBASIC1.69□□□□□ -2.14
USF1P22415 MIR5002-201ENST00000584713 97 ntBASIC1.69□□□□□ -2.14
USF1P22415 AC009314.1-201ENST00000603871 304 ntBASIC1.69□□□□□ -2.14
USF1P22415 AL022154.1-201ENST00000604698 785 ntBASIC1.69□□□□□ -2.14
USF1P22415 MIR6845-201ENST00000613182 61 ntBASIC1.69□□□□□ -2.14
USF1P22415 AL359547.2-201ENST00000615810 418 ntBASIC1.69□□□□□ -2.14
USF1P22415 SDR42E1P4-201ENST00000620894 481 ntBASIC1.69□□□□□ -2.14
USF1P22415 AC024940.5-201ENST00000622889 474 ntBASIC1.69□□□□□ -2.14
USF1P22415 MIR3529-201ENST00000637713 78 ntBASIC1.69□□□□□ -2.14
USF1P22415 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.69□□□□□ -2.14
USF1P22415 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
USF1P22415 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
USF1P22415 AC073343.1-201ENST00000328239 651 ntBASIC1.68□□□□□ -2.14
USF1P22415 RNU6-858P-201ENST00000362436 107 ntBASIC1.68□□□□□ -2.14
USF1P22415 Y_RNA.140-201ENST00000363474 103 ntBASIC1.68□□□□□ -2.14
USF1P22415 RNU1-57P-201ENST00000384491 166 ntBASIC1.68□□□□□ -2.14
USF1P22415 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
USF1P22415 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
USF1P22415 RNU2-2P-201ENST00000410396 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 RNA5SP338-201ENST00000410495 85 ntBASIC1.68□□□□□ -2.14
USF1P22415 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.68□□□□□ -2.14
USF1P22415 AC016831.2-201ENST00000417179 352 ntBASIC1.68□□□□□ -2.14
USF1P22415 RPL22P18-201ENST00000417197 377 ntBASIC1.68□□□□□ -2.14
USF1P22415 AL365338.1-201ENST00000422282 858 ntBASIC1.68□□□□□ -2.14
USF1P22415 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
USF1P22415 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.68□□□□□ -2.14
USF1P22415 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.68□□□□□ -2.14
USF1P22415 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.68□□□□□ -2.14
USF1P22415 AL583843.1-201ENST00000456070 346 ntBASIC1.68□□□□□ -2.14
USF1P22415 PMCHL2-203ENST00000457791 237 ntBASIC1.68□□□□□ -2.14
USF1P22415 MED28P2-201ENST00000475771 317 ntBASIC1.68□□□□□ -2.14
USF1P22415 HMGB3P17-201ENST00000504195 649 ntBASIC1.68□□□□□ -2.14
USF1P22415 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.68□□□□□ -2.14
USF1P22415 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
USF1P22415 AC107953.1-201ENST00000522216 297 ntBASIC1.68□□□□□ -2.14
USF1P22415 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.68□□□□□ -2.14
USF1P22415 OR5B19P-201ENST00000531766 928 ntBASIC1.68□□□□□ -2.14
USF1P22415 AC091489.2-201ENST00000566263 604 ntBASIC1.68□□□□□ -2.14
USF1P22415 AP002360.4-201ENST00000606980 481 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.15-201ENST00000611544 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.16-201ENST00000613119 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.12-201ENST00000613778 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.20-201ENST00000613956 192 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.9-201ENST00000615427 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.11-201ENST00000616345 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.2-201ENST00000616535 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.3-201ENST00000617785 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.19-201ENST00000618602 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 RNU2-1-201ENST00000618664 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.6-201ENST00000619225 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.5-201ENST00000619465 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 U2.10-201ENST00000620268 191 ntBASIC1.68□□□□□ -2.14
USF1P22415 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.68□□□□□ -2.14
USF1P22415 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
USF1P22415 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.67□□□□□ -2.14
USF1P22415 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.67□□□□□ -2.14
USF1P22415 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
USF1P22415 MIR412-201ENST00000362142 91 ntBASIC1.67□□□□□ -2.14
USF1P22415 RNU6-1010P-201ENST00000362757 107 ntBASIC1.67□□□□□ -2.14
USF1P22415 SNORA75B-201ENST00000384053 137 ntBASIC1.67□□□□□ -2.14
USF1P22415 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
USF1P22415 Y_RNA.623-201ENST00000411128 95 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms