Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 U3.12-201ENST00000364498 214 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU6-384P-201ENST00000364900 104 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU4-48P-201ENST00000365559 182 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU6-1029P-201ENST00000384109 107 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU6-1119P-201ENST00000384349 108 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU6-748P-201ENST00000384648 107 ntBASIC2.17□□□□□ -2.06
SDC1P18827 MIR10A-201ENST00000385043 110 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RPS4XP8-201ENST00000402039 771 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU2-9P-201ENST00000410194 145 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.17□□□□□ -2.06
SDC1P18827 RPL21P90-201ENST00000415692 466 ntBASIC2.17□□□□□ -2.06
SDC1P18827 USP9YP27-201ENST00000418455 438 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.17□□□□□ -2.06
SDC1P18827 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.17□□□□□ -2.06
SDC1P18827 AL627311.1-201ENST00000431514 115 ntBASIC2.17□□□□□ -2.06
SDC1P18827 Z98742.2-201ENST00000431564 187 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.17□□□□□ -2.06
SDC1P18827 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.17□□□□□ -2.06
SDC1P18827 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.17□□□□□ -2.06
SDC1P18827 MTND1P29-201ENST00000448112 647 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.17□□□□□ -2.06
SDC1P18827 RNU7-182P-201ENST00000459009 62 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC011005.2-201ENST00000487324 359 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RN7SL636P-201ENST00000497504 294 ntBASIC2.17□□□□□ -2.06
SDC1P18827 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.17□□□□□ -2.06
SDC1P18827 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RN7SKP298-201ENST00000515950 94 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU1-86P-201ENST00000516108 154 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNA5SP24-201ENST00000516478 95 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNU1-107P-201ENST00000516617 154 ntBASIC2.17□□□□□ -2.06
SDC1P18827 RNA5SP82-201ENST00000516707 92 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.17□□□□□ -2.06
SDC1P18827 OR4R1P-201ENST00000529879 463 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.17□□□□□ -2.06
SDC1P18827 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.17□□□□□ -2.06
SDC1P18827 MIR3199-1-201ENST00000582434 88 ntBASIC2.17□□□□□ -2.06
SDC1P18827 NBR2-204ENST00000587322 63 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC073539.2-201ENST00000597113 165 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AL356280.1-201ENST00000603614 379 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AL138889.2-201ENST00000603883 242 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC025449.1-201ENST00000603896 529 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC087045.1-201ENST00000605856 382 ntBASIC2.17□□□□□ -2.06
SDC1P18827 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.17□□□□□ -2.06
SDC1P18827 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.17□□□□□ -2.06
SDC1P18827 SEPT14P19-203ENST00000633205 211 ntBASIC2.17□□□□□ -2.06
SDC1P18827 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
SDC1P18827 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.17□□□□□ -2.06
SDC1P18827 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SDC1P18827 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDC1P18827 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDC1P18827 RNU6-525P-201ENST00000363685 104 ntBASIC2.16□□□□□ -2.06
SDC1P18827 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SDC1P18827 RNU6-220P-201ENST00000390919 107 ntBASIC2.16□□□□□ -2.06
SDC1P18827 FTH1P15-201ENST00000406984 280 ntBASIC2.16□□□□□ -2.06
SDC1P18827 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.16□□□□□ -2.06
SDC1P18827 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.16□□□□□ -2.06
SDC1P18827 MICF-203ENST00000432679 129 ntBASIC2.16□□□□□ -2.06
SDC1P18827 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.16□□□□□ -2.06
SDC1P18827 AC022364.2-201ENST00000457963 554 ntBASIC2.16□□□□□ -2.06
SDC1P18827 snoU109.2-201ENST00000459316 135 ntBASIC2.16□□□□□ -2.06
SDC1P18827 RNA5SP503-201ENST00000517047 117 ntBASIC2.16□□□□□ -2.06
SDC1P18827 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.16□□□□□ -2.06
SDC1P18827 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.16□□□□□ -2.06
SDC1P18827 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.16□□□□□ -2.06
SDC1P18827 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.16□□□□□ -2.06
SDC1P18827 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.16□□□□□ -2.06
SDC1P18827 uc_338.14-201ENST00000613162 166 ntBASIC2.16□□□□□ -2.06
SDC1P18827 U6.42-201ENST00000618440 107 ntBASIC2.16□□□□□ -2.06
SDC1P18827 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.16□□□□□ -2.06
SDC1P18827 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.16□□□□□ -2.06
SDC1P18827 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDC1P18827 AL109809.4-201ENST00000603520 2185 ntBASIC2.16□□□□□ -2.06
SDC1P18827 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.16□□□□□ -2.06
SDC1P18827 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SDC1P18827 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.15□□□□□ -2.06
SDC1P18827 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
SDC1P18827 RNU6-1287P-201ENST00000362914 107 ntBASIC2.15□□□□□ -2.07
SDC1P18827 RNU6-72P-201ENST00000384285 79 ntBASIC2.15□□□□□ -2.07
SDC1P18827 RNU6-1060P-201ENST00000384664 107 ntBASIC2.15□□□□□ -2.07
SDC1P18827 MIR218-1-201ENST00000384999 110 ntBASIC2.15□□□□□ -2.07
SDC1P18827 MTATP6P18-201ENST00000417994 673 ntBASIC2.15□□□□□ -2.07
SDC1P18827 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.15□□□□□ -2.07
SDC1P18827 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.15□□□□□ -2.07
SDC1P18827 AL596276.1-201ENST00000434465 418 ntBASIC2.15□□□□□ -2.07
SDC1P18827 FABP5P14-201ENST00000437273 393 ntBASIC2.15□□□□□ -2.07
SDC1P18827 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.15□□□□□ -2.07
SDC1P18827 AC006512.1-201ENST00000468816 291 ntBASIC2.15□□□□□ -2.07
SDC1P18827 MRPL42P6-201ENST00000486397 371 ntBASIC2.15□□□□□ -2.07
SDC1P18827 AC090096.1-201ENST00000489168 390 ntBASIC2.15□□□□□ -2.07
SDC1P18827 AC092436.1-201ENST00000506450 503 ntBASIC2.15□□□□□ -2.07
SDC1P18827 AC023141.11-201ENST00000508864 202 ntBASIC2.15□□□□□ -2.07
SDC1P18827 PRELID2P1-201ENST00000552837 301 ntBASIC2.15□□□□□ -2.07
SDC1P18827 MIR4703-201ENST00000577728 79 ntBASIC2.15□□□□□ -2.07
SDC1P18827 MTND1P15-201ENST00000579262 949 ntBASIC2.15□□□□□ -2.07
SDC1P18827 MIR4765-201ENST00000585007 77 ntBASIC2.15□□□□□ -2.07
SDC1P18827 AL391646.1-201ENST00000603860 190 ntBASIC2.15□□□□□ -2.07
SDC1P18827 AC245008.1-201ENST00000608123 476 ntBASIC2.15□□□□□ -2.07
SDC1P18827 MIR6895-201ENST00000613497 78 ntBASIC2.15□□□□□ -2.07
SDC1P18827 CTSLP2-204ENST00000629029 392 ntBASIC2.15□□□□□ -2.07
SDC1P18827 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms