Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AL023284.1-201ENST00000403956 276 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 RPS3AP3-201ENST00000411933 242 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AL353621.1-201ENST00000418219 243 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AL160275.3-201ENST00000423876 471 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC009961.2-201ENST00000435771 251 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 NDUFB1P2-201ENST00000449477 176 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AL583843.1-201ENST00000456070 346 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 HMGB3P17-201ENST00000504195 649 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC108078.2-201ENST00000510750 236 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC112206.3-201ENST00000514578 389 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 RNA5SP112-201ENST00000515937 99 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 RNU6-123P-201ENST00000516163 102 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 SCARNA24.1-201ENST00000516465 137 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC090572.1-201ENST00000519251 160 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC135279.1-201ENST00000543493 504 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC092325.1-201ENST00000566449 554 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC008521.1-201ENST00000587471 187 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC087045.1-201ENST00000605856 382 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 AC007494.3-201ENST00000624660 743 ntBASIC1.63□□□□□ -2.15
HLA-DQB1P01920 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DQB1P01920 Z75746.1-201ENST00000440243 2080 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 RNU2-39P-201ENST00000410604 198 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 Y_RNA.623-201ENST00000411128 95 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 EEF1A1P40-201ENST00000412883 573 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC097463.2-201ENST00000421074 142 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AL365338.1-201ENST00000422282 858 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 MTCYBP5-201ENST00000423752 1135 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 PSPHP1-201ENST00000450062 261 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 RPL36AP48-201ENST00000485521 314 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 SMURF2P1-201ENST00000514992 481 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 RNU7-193P-201ENST00000516723 65 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC060788.1-201ENST00000521318 469 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 CBX3P7-201ENST00000532876 502 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 CYCSP26-201ENST00000534107 320 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC012414.6-201ENST00000568241 401 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC010928.2-201ENST00000588017 287 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC008749.1-201ENST00000597650 306 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AL670379.10-201ENST00000604330 253 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AL670379.9-201ENST00000605428 253 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AL121992.2-201ENST00000606262 256 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 RNU6-91P-201ENST00000607774 107 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AL161423.1-201ENST00000613700 262 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AL162373.1-201ENST00000620433 407 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 AC091932.3-201ENST00000624223 323 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 MIR219B-201ENST00000637023 88 ntBASIC1.62□□□□□ -2.15
HLA-DQB1P01920 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQB1P01920 MIR412-201ENST00000362142 91 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 SNORD14B-201ENST00000364533 90 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 RNU6-384P-201ENST00000364900 104 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AL133475.1-201ENST00000404414 305 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 RNU2-20P-201ENST00000410425 191 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 MTND3P17-201ENST00000416968 344 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 EIF1AXP1-201ENST00000419267 435 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 CALM2P2-201ENST00000428512 440 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 MTATP6P16-201ENST00000434543 526 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 IFNA20P-201ENST00000436840 528 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AL022238.1-201ENST00000442557 355 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AL360271.2-201ENST00000447710 161 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 GAPDHP17-201ENST00000449858 1001 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 FABP5P13-201ENST00000452144 328 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 MTCYBP1-201ENST00000454315 1119 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AP001486.1-201ENST00000463339 476 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AC068781.1-201ENST00000488231 618 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 RBBP4P6-201ENST00000508098 202 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AC117522.1-201ENST00000509821 380 ntBASIC1.61□□□□□ -2.15
HLA-DQB1P01920 AF213884.2-201ENST00000510417 903 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms