Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 CACYBPP2-201ENST00000453625 678 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 MTCO2P29-201ENST00000465212 189 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 RPS3AP17-201ENST00000472594 777 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 RPL23AP49-201ENST00000492925 468 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 RPL22P13-201ENST00000493291 347 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 AC117522.1-201ENST00000509821 380 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 RNA5SP76-201ENST00000516277 87 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 RNU6-445P-201ENST00000516949 107 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 MTCYBP20-201ENST00000524239 1129 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 OR5AL2P-201ENST00000532185 920 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PDGFBP01127 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.49□□□□□ -2.01
PDGFBP01127 AL391840.1-201ENST00000571144 367 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 MIR4782-201ENST00000577987 79 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 MIR3605-201ENST00000583214 100 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.49□□□□□ -2.01
PDGFBP01127 AC008121.1-201ENST00000603244 268 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PDGFBP01127 AL365204.3-201ENST00000612448 685 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 MIR6873-201ENST00000622788 63 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 FO624990.1-201ENST00000636373 85 ntBASIC2.49□□□□□ -2.01
PDGFBP01127 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PDGFBP01127 Y_RNA.118-201ENST00000363300 101 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 RNU6-960P-201ENST00000364056 120 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 SNORA62.1-201ENST00000364287 154 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 RNU6-1119P-201ENST00000384349 108 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PDGFBP01127 GSTA9P-201ENST00000406231 611 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 U6atac.2-201ENST00000408644 118 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PDGFBP01127 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.48□□□□□ -2.01
PDGFBP01127 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PDGFBP01127 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.48□□□□□ -2.01
PDGFBP01127 FABP5P14-201ENST00000437273 393 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.48□□□□□ -2.01
PDGFBP01127 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.48□□□□□ -2.01
PDGFBP01127 C1DP4-201ENST00000455429 424 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 RN7SKP210-201ENST00000459176 261 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AL121769.1-201ENST00000469473 401 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 MTCO3P7-201ENST00000510008 774 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.48□□□□□ -2.01
PDGFBP01127 RNU6-1183P-201ENST00000517054 60 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 CKS1BP7-201ENST00000522230 235 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC084851.1-201ENST00000529105 249 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.48□□□□□ -2.01
PDGFBP01127 SUB1P2-201ENST00000556401 297 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.48□□□□□ -2.01
PDGFBP01127 MIR5571-201ENST00000577998 113 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.48□□□□□ -2.01
PDGFBP01127 AC103987.3-201ENST00000582071 292 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC023043.2-201ENST00000589678 1026 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC005261.5-201ENST00000596280 355 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC126118.1-201ENST00000607744 628 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 AC009509.4-201ENST00000619202 509 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 MTND5P42-201ENST00000637720 498 ntBASIC2.48□□□□□ -2.01
PDGFBP01127 Z82209.1-201ENST00000422141 2135 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 Y_RNA.296-201ENST00000364930 108 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PDGFBP01127 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.47□□□□□ -2.01
PDGFBP01127 AC133104.1-201ENST00000429100 218 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 GPR143P-201ENST00000434155 205 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.47□□□□□ -2.01
PDGFBP01127 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.47□□□□□ -2.01
PDGFBP01127 RPS15AP9-201ENST00000439856 381 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.47□□□□□ -2.01
PDGFBP01127 AC003071.1-201ENST00000451219 789 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.47□□□□□ -2.01
PDGFBP01127 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.47□□□□□ -2.01
PDGFBP01127 AP004217.1-201ENST00000480579 346 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC116562.3-201ENST00000506136 177 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.47□□□□□ -2.01
PDGFBP01127 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PDGFBP01127 RNU6-914P-201ENST00000516749 109 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC090572.1-201ENST00000519251 160 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC068587.5-201ENST00000528506 175 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.47□□□□□ -2.01
PDGFBP01127 ADI1P3-201ENST00000549509 470 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.47□□□□□ -2.01
PDGFBP01127 AC105245.1-201ENST00000581934 244 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.47□□□□□ -2.01
PDGFBP01127 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.47□□□□□ -2.01
PDGFBP01127 AC091805.2-201ENST00000603848 235 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC008536.2-201ENST00000607284 349 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 MIR15A-201ENST00000607334 83 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 AC093536.2-201ENST00000565257 1406 ntBASIC2.47□□□□□ -2.01
PDGFBP01127 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDGFBP01127 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
PDGFBP01127 AL109809.4-201ENST00000603520 2185 ntBASIC2.46□□□□□ -2.02
PDGFBP01127 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PDGFBP01127 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms