Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.279-201ENST00000364763 95 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 SNORA75B-201ENST00000384053 137 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 SNORA7.4-201ENST00000384249 137 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 MIR512-1-201ENST00000384913 84 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.68□□□□□ -1.98
CLPTM1O96005 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.68□□□□□ -1.98
CLPTM1O96005 RPL21P90-201ENST00000415692 466 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.68□□□□□ -1.98
CLPTM1O96005 SUMO1P4-201ENST00000429430 302 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.68□□□□□ -1.98
CLPTM1O96005 RPL23AP83-201ENST00000434984 473 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 USP9YP8-201ENST00000441913 500 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 PRPS1P1-201ENST00000445305 876 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AL360271.2-201ENST00000447710 161 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 MTND5P20-201ENST00000448677 143 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLPTM1O96005 PMCHL2-203ENST00000457791 237 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC092798.1-201ENST00000458542 409 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 RNU6-1208P-201ENST00000459588 107 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 DYNLL1P5-201ENST00000467158 270 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.68□□□□□ -1.98
CLPTM1O96005 AC139453.3-201ENST00000493276 369 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.68□□□□□ -1.98
CLPTM1O96005 AC010486.1-201ENST00000511793 424 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 RNU2-69P-201ENST00000516061 100 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 Y_RNA.702-201ENST00000516843 96 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 RNU6-1314P-201ENST00000517139 104 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.68□□□□□ -1.98
CLPTM1O96005 AP000867.2-201ENST00000532468 320 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AL157871.3-201ENST00000557231 293 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLPTM1O96005 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.68□□□□□ -1.98
CLPTM1O96005 AC073539.2-201ENST00000597113 165 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 ATP1B3P1-201ENST00000605365 821 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC004805.2-201ENST00000605382 482 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 CTHRC1P1-201ENST00000605383 469 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.68□□□□□ -1.98
CLPTM1O96005 AC091953.5-201ENST00000622919 233 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC099506.2-201ENST00000623074 221 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AC005858.4-201ENST00000623191 700 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 AL008636.1-201ENST00000625038 1018 ntBASIC2.68□□□□□ -1.98
CLPTM1O96005 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
CLPTM1O96005 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.68□□□□□ -1.98
CLPTM1O96005 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.67□□□□□ -1.98
CLPTM1O96005 AL035425.3-201ENST00000564206 4996 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.67□□□□□ -1.98
CLPTM1O96005 SNORD3E-201ENST00000362899 217 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 Y_RNA.373-201ENST00000365600 103 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 RNU6-393P-201ENST00000384475 107 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 RNU6-140P-201ENST00000384566 108 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 SNORD15B-201ENST00000384714 146 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 SNORD67-201ENST00000390833 111 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 RNA5SP219-201ENST00000390940 113 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 RNU6-1025P-201ENST00000410629 104 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 POLHP1-201ENST00000411806 470 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.67□□□□□ -1.98
CLPTM1O96005 AL513185.2-201ENST00000425543 193 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 ZNF863P-201ENST00000426746 417 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.67□□□□□ -1.98
CLPTM1O96005 AC098614.3-201ENST00000438957 440 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 RPL12P25-201ENST00000455592 494 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 AC022493.1-201ENST00000492984 337 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 Y_RNA.654-201ENST00000497848 106 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 HMGN1P12-201ENST00000499125 195 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 AC091885.1-201ENST00000506658 268 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLPTM1O96005 OR11H5P-201ENST00000554039 926 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 MIR3605-201ENST00000583214 100 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 MIR548AC-201ENST00000585049 88 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 AC011712.1-201ENST00000588959 234 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 AC060766.3-201ENST00000591442 263 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 BNIP3P25-201ENST00000596023 559 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 VN1R80P-201ENST00000597126 338 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.67□□□□□ -1.98
CLPTM1O96005 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.67□□□□□ -1.98
CLPTM1O96005 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.67□□□□□ -1.98
CLPTM1O96005 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.67□□□□□ -1.98
CLPTM1O96005 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CLPTM1O96005 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLPTM1O96005 AC008669.1-201ENST00000565823 2178 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 CBX3P1-201ENST00000325243 554 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 FTLP6-201ENST00000355274 422 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 Y_RNA.72-201ENST00000362894 103 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 RNU6-371P-201ENST00000364283 108 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLPTM1O96005 RNU6-45P-201ENST00000384471 107 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 MIR301A-201ENST00000385261 86 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 SNORA48.2-201ENST00000390926 124 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 AL512633.1-201ENST00000399931 655 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLPTM1O96005 RNU2-68P-201ENST00000410878 191 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 AC009161.1-201ENST00000417306 376 ntBASIC2.66□□□□□ -1.98
CLPTM1O96005 AC092047.1-201ENST00000424997 240 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms