Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-685P-201ENST00000517088 95 ntBASIC3.06□□□□□ -1.92
DDX58O95786 BTF3P12-201ENST00000519620 469 ntBASIC3.06□□□□□ -1.92
DDX58O95786 OR5BN1P-201ENST00000532955 829 ntBASIC3.06□□□□□ -1.92
DDX58O95786 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.06□□□□□ -1.92
DDX58O95786 MIR4765-201ENST00000585007 77 ntBASIC3.06□□□□□ -1.92
DDX58O95786 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.06□□□□□ -1.92
DDX58O95786 AC012507.3-201ENST00000603556 477 ntBASIC3.06□□□□□ -1.92
DDX58O95786 AL645944.1-201ENST00000603857 493 ntBASIC3.06□□□□□ -1.92
DDX58O95786 AL627309.6-201ENST00000606857 840 ntBASIC3.06□□□□□ -1.92
DDX58O95786 AC064807.4-201ENST00000607201 407 ntBASIC3.06□□□□□ -1.92
DDX58O95786 MIR6863-201ENST00000636112 90 ntBASIC3.06□□□□□ -1.92
DDX58O95786 AC093536.2-201ENST00000565257 1406 ntBASIC3.05□□□□□ -1.92
DDX58O95786 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.05□□□□□ -1.92
DDX58O95786 Y_RNA.159-201ENST00000363674 87 ntBASIC3.05□□□□□ -1.92
DDX58O95786 Z98749.2-208ENST00000381646 500 ntBASIC3.05□□□□□ -1.92
DDX58O95786 RNU6-1103P-201ENST00000384150 107 ntBASIC3.05□□□□□ -1.92
DDX58O95786 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
DDX58O95786 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
DDX58O95786 AL591416.1-201ENST00000404015 867 ntBASIC3.05□□□□□ -1.92
DDX58O95786 RN7SKP284-201ENST00000411002 343 ntBASIC3.05□□□□□ -1.92
DDX58O95786 RNU2-25P-201ENST00000411041 191 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.05□□□□□ -1.92
DDX58O95786 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.05□□□□□ -1.92
DDX58O95786 RPL21P90-201ENST00000415692 466 ntBASIC3.05□□□□□ -1.92
DDX58O95786 MTCO3P30-201ENST00000426425 670 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX58O95786 AL589823.1-201ENST00000429577 183 ntBASIC3.05□□□□□ -1.92
DDX58O95786 VN1R108P-201ENST00000431580 830 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX58O95786 FABP5P14-201ENST00000437273 393 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX58O95786 AL121769.1-201ENST00000469473 401 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC022493.1-201ENST00000492984 337 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC091133.4-201ENST00000511142 308 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.05□□□□□ -1.92
DDX58O95786 AC112206.3-201ENST00000514578 389 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX58O95786 RN7SKP40-201ENST00000517211 242 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.05□□□□□ -1.92
DDX58O95786 AC092325.1-201ENST00000566449 554 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC087045.1-201ENST00000605856 382 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC008945.2-201ENST00000606056 604 ntBASIC3.05□□□□□ -1.92
DDX58O95786 uc_338.14-201ENST00000613162 166 ntBASIC3.05□□□□□ -1.92
DDX58O95786 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.05□□□□□ -1.92
DDX58O95786 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC064859.1-201ENST00000624741 174 ntBASIC3.05□□□□□ -1.92
DDX58O95786 Z82195.2-201ENST00000612348 18351 ntBASIC3.05□□□□□ -1.92
DDX58O95786 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
DDX58O95786 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
DDX58O95786 CDC27P3-201ENST00000635418 1910 ntBASIC3.05□□□□□ -1.92
DDX58O95786 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
DDX58O95786 RNU6-461P-201ENST00000364195 107 ntBASIC3.04□□□□□ -1.92
DDX58O95786 RNU6-606P-201ENST00000384721 111 ntBASIC3.04□□□□□ -1.92
DDX58O95786 AC068050.1-201ENST00000394891 380 ntBASIC3.04□□□□□ -1.92
DDX58O95786 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX58O95786 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.04□□□□□ -1.92
DDX58O95786 AL627311.1-201ENST00000431514 115 ntBASIC3.04□□□□□ -1.92
DDX58O95786 Z98742.2-201ENST00000431564 187 ntBASIC3.04□□□□□ -1.92
DDX58O95786 RPS12P2-201ENST00000439728 269 ntBASIC3.04□□□□□ -1.92
DDX58O95786 AL445687.1-201ENST00000439946 251 ntBASIC3.04□□□□□ -1.92
DDX58O95786 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.04□□□□□ -1.92
DDX58O95786 HIGD1AP2-201ENST00000446367 280 ntBASIC3.04□□□□□ -1.92
DDX58O95786 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX58O95786 AC026436.1-201ENST00000510537 270 ntBASIC3.04□□□□□ -1.92
DDX58O95786 ACA59.2-201ENST00000517061 156 ntBASIC3.04□□□□□ -1.92
DDX58O95786 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX58O95786 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX58O95786 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX58O95786 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX58O95786 AL391646.1-201ENST00000603860 190 ntBASIC3.04□□□□□ -1.92
DDX58O95786 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX58O95786 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
DDX58O95786 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DDX58O95786 AC069528.2-201ENST00000624849 1991 ntBASIC3.03□□□□□ -1.92
DDX58O95786 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX58O95786 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DDX58O95786 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
DDX58O95786 OR4G2P-201ENST00000328113 903 ntBASIC3.03□□□□□ -1.92
DDX58O95786 Y_RNA.381-201ENST00000365666 102 ntBASIC3.03□□□□□ -1.92
DDX58O95786 MIR578-201ENST00000384828 96 ntBASIC3.03□□□□□ -1.92
DDX58O95786 MIR218-1-201ENST00000384999 110 ntBASIC3.03□□□□□ -1.92
DDX58O95786 MIR10A-201ENST00000385043 110 ntBASIC3.03□□□□□ -1.92
DDX58O95786 RNU6-550P-201ENST00000391057 101 ntBASIC3.03□□□□□ -1.92
DDX58O95786 BX682237.1-201ENST00000415016 335 ntBASIC3.03□□□□□ -1.92
DDX58O95786 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX58O95786 OOSP1P1-201ENST00000423265 274 ntBASIC3.03□□□□□ -1.92
DDX58O95786 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.03□□□□□ -1.92
DDX58O95786 AL596276.1-201ENST00000434465 418 ntBASIC3.03□□□□□ -1.92
DDX58O95786 RNU7-63P-201ENST00000459054 62 ntBASIC3.03□□□□□ -1.92
DDX58O95786 RPS27AP9-201ENST00000477681 438 ntBASIC3.03□□□□□ -1.92
DDX58O95786 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.92
DDX58O95786 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 HMGB1P30-201ENST00000492455 606 ntBASIC3.03□□□□□ -1.92
DDX58O95786 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 RPL22P13-201ENST00000493291 347 ntBASIC3.03□□□□□ -1.92
DDX58O95786 AC008716.1-201ENST00000511084 513 ntBASIC3.03□□□□□ -1.92
DDX58O95786 SNORA31.6-201ENST00000516241 130 ntBASIC3.03□□□□□ -1.92
DDX58O95786 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms