Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 HLA-N-201ENST00000437516 135 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 AL138752.1-201ENST00000452964 351 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 RN7SL293P-201ENST00000481765 281 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 AC067942.3-201ENST00000512025 362 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 RNU6-911P-201ENST00000516523 104 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 AC109329.1-201ENST00000518744 317 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCD1O75127 CBX3P4-201ENST00000538909 354 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 AC004832.4-201ENST00000608952 331 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 AC009318.2-201ENST00000610917 651 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 AC090617.7-201ENST00000623952 126 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTCD1O75127 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
PTCD1O75127 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCD1O75127 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PTCD1O75127 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PTCD1O75127 HSPA8P1-201ENST00000425843 1833 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCD1O75127 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCD1O75127 SNORD50.1-201ENST00000362987 71 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 RNU6-682P-201ENST00000363843 106 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 RNU5E-7P-201ENST00000365290 117 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCD1O75127 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCD1O75127 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCD1O75127 AC083863.1-201ENST00000438811 231 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 HIGD1AP2-201ENST00000446367 280 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 Y_RNA.644-201ENST00000459006 113 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 AC006517.1-201ENST00000480485 328 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 AC106707.2-201ENST00000484182 374 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCD1O75127 Y_RNA.674-201ENST00000516362 113 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 FTH1P11-201ENST00000517577 551 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 AC087441.2-201ENST00000529141 262 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 AL590705.4-201ENST00000532209 134 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCD1O75127 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCD1O75127 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCD1O75127 MIR4643-201ENST00000577473 78 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 U3.45-201ENST00000607547 219 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 U6.99-201ENST00000637524 83 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
PTCD1O75127 AC027290.2-201ENST00000623210 18662 ntBASIC4.97□□□□□ -1.61
PTCD1O75127 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
PTCD1O75127 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PTCD1O75127 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCD1O75127 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCD1O75127 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PTCD1O75127 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCD1O75127 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCD1O75127 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTCD1O75127 RNA5SP51-201ENST00000364750 119 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 MIR1298-201ENST00000408783 112 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 Y_RNA.793-201ENST00000411222 111 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCD1O75127 HMGN2P21-201ENST00000447764 270 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCD1O75127 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCD1O75127 RN7SL271P-201ENST00000487601 295 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 RPL30P10-201ENST00000488148 337 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 AC074250.1-201ENST00000511117 192 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTCD1O75127 RNU4-71P-201ENST00000516258 113 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 IGKV2-23-201ENST00000518729 323 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 DEFB108E-201ENST00000524692 240 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCD1O75127 TRAV28-201ENST00000557548 323 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 MIR5187-201ENST00000583479 76 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 AC008962.1-201ENST00000605729 304 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 AC099506.2-201ENST00000623074 221 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCD1O75127 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCD1O75127 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTCD1O75127 AC008568.2-201ENST00000623862 2313 ntBASIC4.96□□□□□ -1.62
PTCD1O75127 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTCD1O75127 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.95□□□□□ -1.62
PTCD1O75127 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCD1O75127 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PTCD1O75127 snoU2_19.2-201ENST00000363024 80 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 Y_RNA.123-201ENST00000363338 102 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 MIR491-201ENST00000384877 84 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 SNORA3C-201ENST00000408792 125 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCD1O75127 RPEP5-201ENST00000441137 268 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.95□□□□□ -1.62
PTCD1O75127 AC009237.8-201ENST00000445492 379 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTCD1O75127 RPS29P26-201ENST00000477483 171 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCD1O75127 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCD1O75127 AC034114.1-201ENST00000520293 285 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 AC007458.1-201ENST00000542812 373 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 AC005476.1-201ENST00000554427 397 ntBASIC4.95□□□□□ -1.62
PTCD1O75127 AL136964.1-201ENST00000622038 2990 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms