Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SNORA31.8-201ENST00000516327 108 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 COX6CP5-201ENST00000527162 228 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 RANP3-201ENST00000530970 276 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.18□□□□□ -1.9
SMAD6O43541 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.18□□□□□ -1.9
SMAD6O43541 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.18□□□□□ -1.9
SMAD6O43541 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.18□□□□□ -1.9
SMAD6O43541 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
SMAD6O43541 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.18□□□□□ -1.9
SMAD6O43541 RPL23AP84-201ENST00000571193 464 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 MIR4503-201ENST00000582187 83 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC006006.1-201ENST00000603082 144 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 ATP1B3P1-201ENST00000605365 821 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC009570.1-201ENST00000609599 745 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
SMAD6O43541 AL138726.1-201ENST00000614873 333 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 FAM157A-202ENST00000615155 405 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 MIR6076-201ENST00000617521 113 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 SNHG22-203ENST00000617833 660 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC098657.3-201ENST00000620434 263 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
SMAD6O43541 AC103710.2-202ENST00000641454 2853 ntBASIC3.18□□□□□ -1.9
SMAD6O43541 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMAD6O43541 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SMAD6O43541 AL353743.1-202ENST00000431724 1695 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SMAD6O43541 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMAD6O43541 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
SMAD6O43541 Y_RNA.5-201ENST00000362334 102 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AL360182.1-201ENST00000397433 468 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 MIR450B-201ENST00000401182 78 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AL160004.2-201ENST00000432935 350 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.17□□□□□ -1.9
SMAD6O43541 DYNLL1P5-201ENST00000467158 270 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 RPS29P2-201ENST00000479278 136 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 RPL30P14-201ENST00000482744 348 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD6O43541 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD6O43541 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMAD6O43541 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 HMGN1P28-201ENST00000521340 364 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD6O43541 AC100870.1-201ENST00000522035 505 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AL117187.1-201ENST00000555482 181 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.17□□□□□ -1.9
SMAD6O43541 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.17□□□□□ -1.9
SMAD6O43541 MIR4680-201ENST00000580906 66 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 MIR4325-201ENST00000583049 90 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AL031176.1-201ENST00000604554 466 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 TUG1_2.1-201ENST00000614234 87 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AC099506.2-201ENST00000623074 221 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AC073476.4-201ENST00000628409 72 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 AL669831.3-213ENST00000636676 183 ntBASIC3.17□□□□□ -1.9
SMAD6O43541 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SMAD6O43541 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMAD6O43541 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMAD6O43541 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.16□□□□□ -1.9
SMAD6O43541 AC090740.1-201ENST00000623193 2262 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.16□□□□□ -1.9
SMAD6O43541 RNU6-1115P-201ENST00000362490 106 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 SNORA54-201ENST00000384281 123 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 SNORD15B-201ENST00000384714 146 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 SNORD67-201ENST00000390833 111 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 SNORA16.2-201ENST00000390991 127 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 SNORD70.1-201ENST00000391007 85 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 RNU6-712P-201ENST00000410558 100 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.16□□□□□ -1.9
SMAD6O43541 CALM2P2-201ENST00000428512 440 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD6O43541 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.16□□□□□ -1.9
SMAD6O43541 AL035666.1-201ENST00000446195 348 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD6O43541 AL162389.1-201ENST00000449233 177 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC234775.1-201ENST00000454247 670 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC008481.1-201ENST00000463278 396 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.16□□□□□ -1.9
SMAD6O43541 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD6O43541 AC079140.5-201ENST00000507882 310 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 RNU6-976P-201ENST00000516086 111 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 RNU6-123P-201ENST00000516163 102 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AP003122.3-201ENST00000526316 255 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD6O43541 AC090115.3-201ENST00000553218 849 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC106782.4-201ENST00000568264 210 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.16□□□□□ -1.9
SMAD6O43541 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
SMAD6O43541 AL670379.6-201ENST00000603753 252 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC008162.1-201ENST00000604718 254 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL670379.1-201ENST00000604752 252 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL670379.5-201ENST00000605253 252 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL670379.4-201ENST00000605279 254 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL670379.8-201ENST00000605353 252 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL670379.7-201ENST00000605823 252 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms