Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-387P-201ENST00000411331 105 ntBASIC2.67□□□□□ -1.98
O00370 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
O00370 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.67□□□□□ -1.98
O00370 SKA2P1-201ENST00000425592 390 ntBASIC2.67□□□□□ -1.98
O00370 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.67□□□□□ -1.98
O00370 DNAJC19P4-201ENST00000440115 345 ntBASIC2.67□□□□□ -1.98
O00370 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.67□□□□□ -1.98
O00370 PSPHP1-201ENST00000450062 261 ntBASIC2.67□□□□□ -1.98
O00370 AC233279.1-201ENST00000455300 423 ntBASIC2.67□□□□□ -1.98
O00370 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.67□□□□□ -1.98
O00370 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
O00370 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.67□□□□□ -1.98
O00370 RPS27AP10-201ENST00000496103 208 ntBASIC2.67□□□□□ -1.98
O00370 RNU6-1178P-201ENST00000516674 107 ntBASIC2.67□□□□□ -1.98
O00370 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.67□□□□□ -1.98
O00370 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.67□□□□□ -1.98
O00370 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.67□□□□□ -1.98
O00370 AP001893.2-201ENST00000526949 202 ntBASIC2.67□□□□□ -1.98
O00370 MIR548AC-201ENST00000585049 88 ntBASIC2.67□□□□□ -1.98
O00370 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.67□□□□□ -1.98
O00370 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.67□□□□□ -1.98
O00370 AC008945.2-201ENST00000606056 604 ntBASIC2.67□□□□□ -1.98
O00370 MIR6817-201ENST00000615588 66 ntBASIC2.67□□□□□ -1.98
O00370 AL359880.1-201ENST00000621879 266 ntBASIC2.67□□□□□ -1.98
O00370 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.67□□□□□ -1.98
O00370 ADAM3A-203ENST00000461344 2157 ntBASIC2.67□□□□□ -1.98
O00370 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
O00370 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.67□□□□□ -1.98
O00370 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
O00370 SNORD3E-201ENST00000362899 217 ntBASIC2.66□□□□□ -1.98
O00370 RNU6-996P-201ENST00000365438 107 ntBASIC2.66□□□□□ -1.98
O00370 RNU6-606P-201ENST00000384721 111 ntBASIC2.66□□□□□ -1.98
O00370 AL590002.1-201ENST00000406554 418 ntBASIC2.66□□□□□ -1.98
O00370 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.66□□□□□ -1.98
O00370 CALM2P2-201ENST00000428512 440 ntBASIC2.66□□□□□ -1.98
O00370 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 AL591704.1-201ENST00000432574 275 ntBASIC2.66□□□□□ -1.98
O00370 AL596276.1-201ENST00000434465 418 ntBASIC2.66□□□□□ -1.98
O00370 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.66□□□□□ -1.98
O00370 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 AL583843.1-201ENST00000456070 346 ntBASIC2.66□□□□□ -1.98
O00370 RNU7-26P-201ENST00000458980 63 ntBASIC2.66□□□□□ -1.98
O00370 AC128713.1-201ENST00000471495 306 ntBASIC2.66□□□□□ -1.98
O00370 TRBV1-201ENST00000476502 284 ntBASIC2.66□□□□□ -1.98
O00370 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.66□□□□□ -1.98
O00370 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.66□□□□□ -1.98
O00370 AC009646.1-201ENST00000510455 318 ntBASIC2.66□□□□□ -1.98
O00370 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 RN7SKP24-201ENST00000515888 284 ntBASIC2.66□□□□□ -1.98
O00370 BNIP3P6-201ENST00000549284 499 ntBASIC2.66□□□□□ -1.98
O00370 AL512360.1-201ENST00000555346 234 ntBASIC2.66□□□□□ -1.98
O00370 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.66□□□□□ -1.98
O00370 MIR4782-201ENST00000577987 79 ntBASIC2.66□□□□□ -1.98
O00370 AL356280.1-201ENST00000603614 379 ntBASIC2.66□□□□□ -1.98
O00370 AL355598.1-201ENST00000604169 202 ntBASIC2.66□□□□□ -1.98
O00370 AC092954.2-201ENST00000609103 430 ntBASIC2.66□□□□□ -1.98
O00370 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.66□□□□□ -1.98
O00370 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.66□□□□□ -1.98
O00370 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
O00370 HSPA8P4-201ENST00000511877 1920 ntBASIC2.66□□□□□ -1.98
O00370 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
O00370 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
O00370 RNA5SP456-201ENST00000364002 114 ntBASIC2.65□□□□□ -1.99
O00370 RNU6-395P-201ENST00000365662 106 ntBASIC2.65□□□□□ -1.99
O00370 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
O00370 MIR578-201ENST00000384828 96 ntBASIC2.65□□□□□ -1.99
O00370 RNU6-1158P-201ENST00000391167 107 ntBASIC2.65□□□□□ -1.99
O00370 RPL26P27-201ENST00000414397 437 ntBASIC2.65□□□□□ -1.99
O00370 RPL21P90-201ENST00000415692 466 ntBASIC2.65□□□□□ -1.99
O00370 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.65□□□□□ -1.99
O00370 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.65□□□□□ -1.99
O00370 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 FDX1P2-201ENST00000450769 375 ntBASIC2.65□□□□□ -1.99
O00370 AL118520.1-201ENST00000450770 291 ntBASIC2.65□□□□□ -1.99
O00370 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 AP000852.1-201ENST00000472460 573 ntBASIC2.65□□□□□ -1.99
O00370 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 RNA5SP148-201ENST00000516527 94 ntBASIC2.65□□□□□ -1.99
O00370 RNU6-685P-201ENST00000517088 95 ntBASIC2.65□□□□□ -1.99
O00370 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.65□□□□□ -1.99
O00370 AC009902.1-201ENST00000519351 183 ntBASIC2.65□□□□□ -1.99
O00370 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.65□□□□□ -1.99
O00370 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.65□□□□□ -1.99
O00370 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.65□□□□□ -1.99
O00370 OR5BN1P-201ENST00000532955 829 ntBASIC2.65□□□□□ -1.99
O00370 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.65□□□□□ -1.99
O00370 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.65□□□□□ -1.99
O00370 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.65□□□□□ -1.99
O00370 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
O00370 AC007621.1-201ENST00000604544 437 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms