Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-108P-201ENST00000365558 107 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 RNU6-116P-201ENST00000384042 109 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 RNU6-166P-201ENST00000384371 107 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 MIR1-2-201ENST00000384961 85 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.27□□□□□ -2.05
PDLIM1O00151 CALM2P2-201ENST00000428512 440 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.27□□□□□ -2.05
PDLIM1O00151 MTND2P22-201ENST00000444325 1033 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.27□□□□□ -2.05
PDLIM1O00151 SNORA59A-201ENST00000459326 152 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC107626.1-201ENST00000471084 183 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.27□□□□□ -2.05
PDLIM1O00151 AC023194.1-201ENST00000493084 308 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC023141.11-201ENST00000508864 202 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 RNU6-445P-201ENST00000516949 107 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.27□□□□□ -2.05
PDLIM1O00151 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.27□□□□□ -2.05
PDLIM1O00151 AL391840.1-201ENST00000571144 367 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC068790.2-201ENST00000602601 557 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AL022154.1-201ENST00000604698 785 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 HMGB1P24-202ENST00000615653 685 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.27□□□□□ -2.05
PDLIM1O00151 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM1O00151 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM1O00151 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM1O00151 AC069528.2-201ENST00000624849 1991 ntBASIC2.27□□□□□ -2.05
PDLIM1O00151 MIR412-201ENST00000362142 91 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RNU6-1287P-201ENST00000362914 107 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 U3.12-201ENST00000364498 214 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RNA5SP138-201ENST00000365098 114 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 SNORA75-201ENST00000384158 137 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RNU6-74P-201ENST00000384235 107 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 SNORD116-1-201ENST00000384335 95 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RNU6-1060P-201ENST00000384664 107 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RNU6-1179P-201ENST00000384667 107 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 SNORA41-201ENST00000384675 132 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 MIR196B-201ENST00000384852 84 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RNA5SP338-201ENST00000410495 85 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AL030996.1-201ENST00000411430 235 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.26□□□□□ -2.05
PDLIM1O00151 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM1O00151 Z98742.2-201ENST00000431564 187 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC236972.1-201ENST00000433225 199 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 MTND4P32-201ENST00000437189 1237 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 GPM6BP3-201ENST00000442797 145 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.26□□□□□ -2.05
PDLIM1O00151 AC079448.1-201ENST00000449377 373 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 PSPHP1-201ENST00000450062 261 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM1O00151 C1DP4-201ENST00000455429 424 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM1O00151 AC022364.2-201ENST00000457963 554 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.26□□□□□ -2.05
PDLIM1O00151 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM1O00151 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 SNORA31.6-201ENST00000516241 130 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RNU6-430P-201ENST00000517078 107 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM1O00151 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM1O00151 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.26□□□□□ -2.05
PDLIM1O00151 AC092325.1-201ENST00000566449 554 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 MIR4765-201ENST00000585007 77 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 RSL24D1P11-201ENST00000591045 491 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC005332.10-201ENST00000612725 619 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 U4.3-201ENST00000621047 82 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AL359740.1-201ENST00000624340 592 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 AC080128.1-201ENST00000474389 1917 ntBASIC2.26□□□□□ -2.05
PDLIM1O00151 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PDLIM1O00151 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
PDLIM1O00151 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDLIM1O00151 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDLIM1O00151 AL136360.1-201ENST00000503377 1900 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDLIM1O00151 SNORA75B-201ENST00000384053 137 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 MIR218-1-201ENST00000384999 110 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 MIR27B-201ENST00000385129 97 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 MIR454-201ENST00000390180 115 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 Y_RNA.623-201ENST00000411128 95 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AL365338.1-201ENST00000422282 858 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 FABP5P14-201ENST00000437273 393 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.25□□□□□ -2.05
PDLIM1O00151 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.25□□□□□ -2.05
PDLIM1O00151 RNU7-182P-201ENST00000459009 62 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 snoU109.2-201ENST00000459316 135 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.25□□□□□ -2.05
PDLIM1O00151 AC006512.1-201ENST00000468816 291 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.25□□□□□ -2.05
PDLIM1O00151 MTND4P2-201ENST00000507767 1203 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC112206.3-201ENST00000514578 389 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 RN7SKP298-201ENST00000515950 94 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 ACA59.2-201ENST00000517061 156 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 MTCO2P4-201ENST00000517968 247 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AP003072.2-201ENST00000527756 676 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 AC025678.1-201ENST00000567861 338 ntBASIC2.25□□□□□ -2.05
PDLIM1O00151 MIR5692A1-201ENST00000580523 69 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms