Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 MIR5680-201ENST00000577577 84 ntBASIC3.81□□□□□ -1.8
LCHNA4D1U4 CPDP1-201ENST00000579660 283 ntBASIC3.81□□□□□ -1.8
LCHNA4D1U4 MIR3171-201ENST00000584270 74 ntBASIC3.81□□□□□ -1.8
LCHNA4D1U4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.81□□□□□ -1.8
LCHNA4D1U4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.81□□□□□ -1.8
LCHNA4D1U4 VN1R107P-201ENST00000601784 209 ntBASIC3.81□□□□□ -1.8
LCHNA4D1U4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LCHNA4D1U4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.81□□□□□ -1.8
LCHNA4D1U4 PLCE1P1-201ENST00000622094 305 ntBASIC3.81□□□□□ -1.8
LCHNA4D1U4 AC244517.12-201ENST00000623581 663 ntBASIC3.81□□□□□ -1.8
LCHNA4D1U4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.81□□□□□ -1.8
LCHNA4D1U4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LCHNA4D1U4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LCHNA4D1U4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LCHNA4D1U4 Y_RNA.445-201ENST00000384168 102 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 RNU6-474P-201ENST00000384243 107 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 SNORA41-201ENST00000384675 132 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC017079.2-201ENST00000416102 485 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 YPEL5P1-201ENST00000419731 367 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 PCMTD1P1-201ENST00000455560 355 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 RPL30P15-201ENST00000457129 321 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC114801.2-201ENST00000503825 781 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 MIR2114-201ENST00000516645 80 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC023442.1-201ENST00000531247 422 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 MIR4782-201ENST00000577987 79 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 LARP7P3-201ENST00000579888 337 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC006504.6-201ENST00000590142 199 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 AL451007.1-201ENST00000595491 289 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC011494.1-201ENST00000596454 237 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 AC019193.3-201ENST00000609144 554 ntBASIC3.8□□□□□ -1.8
LCHNA4D1U4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LCHNA4D1U4 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LCHNA4D1U4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LCHNA4D1U4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LCHNA4D1U4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
LCHNA4D1U4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LCHNA4D1U4 RNU6-778P-201ENST00000363269 103 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.79□□□□□ -1.8
LCHNA4D1U4 RNU6-301P-201ENST00000384277 107 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 MIR10A-201ENST00000385043 110 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 AP000567.1-201ENST00000406413 156 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 Y_RNA.646-201ENST00000410980 101 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LCHNA4D1U4 AL159169.1-201ENST00000421119 127 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.79□□□□□ -1.8
LCHNA4D1U4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.79□□□□□ -1.8
LCHNA4D1U4 HMGN2P30-201ENST00000423237 256 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 MTCO3P10-201ENST00000455912 772 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 RN7SL93P-201ENST00000463035 293 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.79□□□□□ -1.8
LCHNA4D1U4 AC113155.1-201ENST00000511141 769 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 SMURF2P1-201ENST00000514992 481 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 NACAP3-201ENST00000552100 481 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 MTCO3P13-201ENST00000577757 781 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 AC018889.1-201ENST00000605372 397 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 AC009229.3-201ENST00000608056 282 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 uc_338.22-201ENST00000622722 187 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.79□□□□□ -1.8
LCHNA4D1U4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.79□□□□□ -1.8
LCHNA4D1U4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LCHNA4D1U4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LCHNA4D1U4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.78□□□□□ -1.8
LCHNA4D1U4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LCHNA4D1U4 AL365361.1-201ENST00000566942 3481 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LCHNA4D1U4 MIR369-201ENST00000362155 70 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 RNU6-1115P-201ENST00000362490 106 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 MIR517A-201ENST00000385001 87 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 MIR325-201ENST00000385260 98 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 RPL31P12-201ENST00000422587 358 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 AC007560.1-201ENST00000426912 237 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.78□□□□□ -1.8
LCHNA4D1U4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 AL133396.1-201ENST00000432048 687 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 SNRPEP4-201ENST00000435815 279 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 HMGB3P8-201ENST00000449709 577 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 RNU7-187P-201ENST00000458985 68 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 S100A11P2-201ENST00000467589 312 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.78□□□□□ -1.8
LCHNA4D1U4 AL163540.1-201ENST00000485382 386 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 AC139453.3-201ENST00000493276 369 ntBASIC3.78□□□□□ -1.8
LCHNA4D1U4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms