Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC78A2IDD5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC78A2IDD5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 Y_RNA.133-201ENST00000363428 110 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RNU6-512P-201ENST00000364438 103 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 Y_RNA.245-201ENST00000364493 95 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RNU6-1303P-201ENST00000364841 107 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 Y_RNA.404-201ENST00000383978 102 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RNU6-1179P-201ENST00000384667 107 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 MIR7-3-201ENST00000384898 110 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 MRPL42P3-201ENST00000401492 326 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RNU6-985P-201ENST00000410182 104 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 SYF2P2-201ENST00000417620 583 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AL158156.1-201ENST00000422509 473 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 HMGB1P9-201ENST00000429856 646 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 HMGN2P20-201ENST00000437531 273 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 MIR2053-201ENST00000459295 91 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RPL30P14-201ENST00000482744 348 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RPL30P5-201ENST00000494923 336 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC015911.1-201ENST00000495111 156 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RN7SKP18-201ENST00000516005 275 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RNU6-1213P-201ENST00000517075 94 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 RNU6-264P-201ENST00000517134 104 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 CASP1P1-201ENST00000526345 212 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AL645944.1-201ENST00000603857 493 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 NUTF2P8-201ENST00000604593 363 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 ELOCP5-201ENST00000604924 333 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 MIR6076-201ENST00000617521 113 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 AC012314.7-201ENST00000619693 93 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC78A2IDD5 MTND5P30-201ENST00000452896 1731 ntBASIC3.56□□□□□ -1.84
CCDC78A2IDD5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 Y_RNA.428-201ENST00000384078 102 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 SNORA1.3-201ENST00000384676 136 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC091390.3-201ENST00000426478 338 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC099799.1-201ENST00000439809 192 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC011816.1-201ENST00000441346 546 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 PCMTD1P1-201ENST00000455560 355 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 RPL23AP14-201ENST00000468281 468 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 PTP4A1P4-201ENST00000512479 322 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 RNU6-475P-201ENST00000516073 104 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AL160281.1-201ENST00000605307 311 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC027309.3-201ENST00000623419 351 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC092608.2-201ENST00000624427 218 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC118273.1-201ENST00000525324 3006 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 AC068647.1-201ENST00000489539 2265 ntBASIC3.55□□□□□ -1.84
CCDC78A2IDD5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC78A2IDD5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC78A2IDD5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC78A2IDD5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC78A2IDD5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC78A2IDD5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 MIR517A-201ENST00000385001 87 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 RNU6-308P-201ENST00000390957 107 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 EI24P2-201ENST00000397776 1076 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 U3.39-201ENST00000408569 239 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 RNU6-55P-201ENST00000411092 107 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 AL030996.1-201ENST00000411430 235 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC78A2IDD5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC78A2IDD5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC78A2IDD5 AL158071.1-201ENST00000430315 461 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 USP9YP30-201ENST00000430729 455 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 MYL8P-204ENST00000431574 518 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 HMGN2P31-201ENST00000432430 273 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 AL590664.1-201ENST00000448065 339 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 BTF3P15-201ENST00000455606 336 ntBASIC3.54□□□□□ -1.84
CCDC78A2IDD5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms