Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 RNU5B-3P-201ENST00000516601 115 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 CYCSP27-201ENST00000527643 293 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC135279.1-201ENST00000543493 504 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC136619.2-201ENST00000563361 631 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AC021646.1-201ENST00000605469 484 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 RNU6-91P-201ENST00000607774 107 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 U1.36-201ENST00000620684 176 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 AL512643.1-201ENST00000635735 524 ntBASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV41A0A0B4J266 SNORA4.3-201ENST00000365564 137 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 SMIM11P1-201ENST00000369586 178 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 CISD1P1-201ENST00000393907 327 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 MIR1305-201ENST00000408300 86 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 UBE2V1P4-201ENST00000425374 344 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 TIMM9P1-201ENST00000436122 256 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC104058.1-201ENST00000448028 297 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 MTND1P3-201ENST00000484956 952 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 FAM206BP-201ENST00000510179 541 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 RNA5SP216-201ENST00000516111 123 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 ARL2BPP2-201ENST00000550907 489 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC093249.1-201ENST00000567049 203 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC136618.2-201ENST00000575091 400 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 CLIC4P2-201ENST00000601934 717 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 BNIP3P9-201ENST00000603714 553 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC069431.2-201ENST00000604149 1099 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AL645939.4-201ENST00000604495 135 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 ELOCP5-201ENST00000604924 333 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC087045.1-201ENST00000605856 382 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC080013.3-201ENST00000606839 578 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AC108747.1-201ENST00000609508 535 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 AL356596.1-201ENST00000624230 379 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV41A0A0B4J266 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
TRAV41A0A0B4J266 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
TRAV41A0A0B4J266 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 SNORA4.1-201ENST00000364263 144 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-723P-201ENST00000383973 107 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 MIR30A-201ENST00000385092 71 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 RNU2-36P-201ENST00000410361 191 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-174P-201ENST00000410406 106 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC092809.3-201ENST00000415453 231 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC016831.2-201ENST00000417179 352 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AL078601.1-201ENST00000444542 271 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 BTF3P15-201ENST00000455606 336 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 FCF1P6-201ENST00000456841 595 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC006512.1-201ENST00000468816 291 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-667P-201ENST00000517186 102 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC013828.2-201ENST00000532487 235 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AL356432.3-201ENST00000568952 465 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 MIR4303-201ENST00000581299 66 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 MIR4769-201ENST00000584126 77 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 RPL30P11-203ENST00000598995 310 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC016925.2-201ENST00000605108 242 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC004808.1-201ENST00000627671 721 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 MTND5P42-201ENST00000637720 498 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 TEX21P-201ENST00000447107 1476 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 AC099786.3-201ENST00000565735 1410 ntBASIC1.15□□□□□ -2.23
TRAV41A0A0B4J266 Y_RNA.140-201ENST00000363474 103 ntBASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-338P-201ENST00000383888 105 ntBASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 U8.10-201ENST00000384260 133 ntBASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 RNU1-57P-201ENST00000384491 166 ntBASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-278P-201ENST00000390945 109 ntBASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-1242P-201ENST00000391052 103 ntBASIC1.14□□□□□ -2.23
TRAV41A0A0B4J266 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms