Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL022067.1-201ENST00000602426 454 ntBASIC0.71□□□□□ -2.3
SHANK2Q9UPX8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
SHANK2Q9UPX8 AC068787.1-201ENST00000623908 691 ntBASIC0.71□□□□□ -2.3
SHANK2Q9UPX8 RNU6-486P-201ENST00000363116 107 ntBASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 MIR888-201ENST00000401186 77 ntBASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 AL355615.1-201ENST00000406187 641 ntBASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 UBE2V2P3-201ENST00000433562 437 ntBASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 AC015724.1-201ENST00000478577 156 ntBASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 AC093677.1-201ENST00000514414 678 ntBASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.7□□□□□ -2.3
SHANK2Q9UPX8 MTCO1P23-201ENST00000415223 1526 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 AL359854.1-201ENST00000614203 1594 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 AL591043.1-201ENST00000432461 424 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 RPL26P6-201ENST00000440913 438 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 UBL5P1-201ENST00000507979 193 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 AC019288.1-201ENST00000557918 224 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 SNRPGP17-201ENST00000603780 214 ntBASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
SHANK2Q9UPX8 RNU5E-1-201ENST00000362477 120 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 RNU6-251P-201ENST00000363235 104 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 SNORD51-201ENST00000384320 80 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 RNU6-921P-201ENST00000384361 107 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 MIR329-1-201ENST00000385028 80 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 MIR95-201ENST00000385072 81 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 USP9YP19-201ENST00000412165 485 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 USP9YP13-201ENST00000417797 480 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 BPY2DP-201ENST00000422208 265 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 FCF1P6-201ENST00000456841 595 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 snoU13.9-201ENST00000458927 103 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 RPL22P13-201ENST00000493291 347 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 RNU6-1256P-201ENST00000516539 103 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 AC124947.2-202ENST00000552735 133 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 AC092953.2-201ENST00000608000 699 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 MIR6718-201ENST00000616153 80 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 AL121890.5-201ENST00000620848 304 ntBASIC0.68□□□□□ -2.3
SHANK2Q9UPX8 OR5T3-201ENST00000303059 1023 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 RNY4P3-201ENST00000365254 95 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 MIR135A2-201ENST00000384854 100 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 MIR518D-201ENST00000385014 87 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 RNU11-3P-201ENST00000391111 133 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 RNA5SP299-201ENST00000391203 116 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC083875.1-201ENST00000419509 405 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC114737.2-201ENST00000421583 173 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 RPP40P1-201ENST00000426762 456 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 MTCO1P3-201ENST00000429327 192 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 RNA5SP404-201ENST00000517118 132 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AP003122.4-201ENST00000530980 758 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC012676.2-201ENST00000619258 186 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AL512506.2-201ENST00000624472 458 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC017104.5-201ENST00000637647 639 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 C1DP1-201ENST00000426049 402 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AL049874.1-201ENST00000489560 388 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC009318.4-201ENST00000620496 486 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 AC007490.1-201ENST00000624321 703 ntBASIC0.67□□□□□ -2.3
SHANK2Q9UPX8 RNU6-271P-201ENST00000363858 105 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 SNORD114-15-201ENST00000364687 72 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 SNORA25B-201ENST00000365507 128 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 RNU2-47P-201ENST00000410649 186 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 AC068135.1-201ENST00000446164 246 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 KATNBL1P6-201ENST00000453433 915 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 RNU6-775P-201ENST00000459318 96 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 RPL30P7-201ENST00000479312 323 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 AC113420.1-201ENST00000507903 571 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 SCARNA15.2-201ENST00000516409 127 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 AL391597.1-201ENST00000618707 694 ntBASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SHANK2Q9UPX8 RNU5A-1-201ENST00000362698 116 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 MIR421-201ENST00000365696 85 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 RNU6-140P-201ENST00000384566 108 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 MIR29C-201ENST00000385231 88 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 RNU2-36P-201ENST00000410361 191 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms