Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.06□□□□□ -2.08
CDH9Q9ULB4 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
CDH9Q9ULB4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH9Q9ULB4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH9Q9ULB4 AC140059.1-201ENST00000489238 361 ntBASIC2.06□□□□□ -2.08
CDH9Q9ULB4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH9Q9ULB4 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
CDH9Q9ULB4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH9Q9ULB4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH9Q9ULB4 MIR6715A-201ENST00000615929 79 ntBASIC2.06□□□□□ -2.08
CDH9Q9ULB4 AC007671.2-201ENST00000637344 619 ntBASIC2.06□□□□□ -2.08
CDH9Q9ULB4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH9Q9ULB4 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AC127391.1-201ENST00000411737 98 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AC009518.2-201ENST00000418056 731 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 TOMM20P4-201ENST00000427861 435 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 RPL23AP30-201ENST00000432419 501 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 MTCYBP39-201ENST00000437562 491 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AL161788.1-201ENST00000441805 169 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 MTAPP1-201ENST00000489154 819 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 RNA5SP337-201ENST00000517007 109 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 MRPS36P3-201ENST00000519284 130 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 EEF1A1P37-201ENST00000522748 715 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 FAM92A1P1-201ENST00000528023 890 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AC087045.1-201ENST00000605856 382 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AP002360.4-201ENST00000606980 481 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AC104010.1-201ENST00000616889 150 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AC098657.3-201ENST00000620434 263 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AC092192.1-201ENST00000633154 1018 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AC006927.3-201ENST00000638789 384 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.05□□□□□ -2.08
CDH9Q9ULB4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH9Q9ULB4 AL356292.1-201ENST00000283110 373 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC073343.1-201ENST00000328239 651 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 RNU5F-6P-201ENST00000362979 116 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 RNU6-1214P-201ENST00000363650 109 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 SNORA75B-201ENST00000384053 137 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 MIR95-201ENST00000385072 81 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AL160275.3-201ENST00000423876 471 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AL365184.2-201ENST00000431139 435 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC009238.1-201ENST00000442165 424 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC009237.6-201ENST00000446969 424 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 FDX1P2-201ENST00000450769 375 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC110588.1-201ENST00000559699 137 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 MIR3126-201ENST00000577443 74 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC007229.1-201ENST00000590455 412 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC008751.2-201ENST00000597885 980 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AL713866.2-201ENST00000603579 219 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AL359999.1-201ENST00000604513 294 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AL022154.1-201ENST00000604698 785 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC105129.3-201ENST00000605455 485 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC096772.1-201ENST00000609146 564 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC024940.5-201ENST00000622889 474 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC068787.1-201ENST00000623908 691 ntBASIC2.04□□□□□ -2.08
CDH9Q9ULB4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH9Q9ULB4 RNU6-500P-201ENST00000362349 107 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CDH9Q9ULB4 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 SNORA46.1-201ENST00000391069 153 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH9Q9ULB4 AL356379.1-201ENST00000414105 126 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 EDDM3CP-201ENST00000415977 425 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 AC016831.2-201ENST00000417179 352 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.03□□□□□ -2.08
CDH9Q9ULB4 AL590365.1-201ENST00000450788 243 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 AL583843.1-201ENST00000456070 346 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 AC117522.2-201ENST00000510049 657 ntBASIC2.03□□□□□ -2.08
CDH9Q9ULB4 AF131216.2-201ENST00000512316 564 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms