Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 U3.26-201ENST00000391236 204 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 RPS4XP7-201ENST00000406274 780 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL031121.1-201ENST00000406553 254 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 MIR1290-201ENST00000408735 78 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL359672.1-201ENST00000442302 409 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 RPS29P31-201ENST00000446147 164 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 NIPA2P5-201ENST00000452282 464 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 Y_RNA.653-201ENST00000459091 95 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AC084357.1-201ENST00000473404 255 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AC026801.1-201ENST00000497178 464 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL359273.1-201ENST00000510918 627 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AC093303.1-201ENST00000514549 295 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 RNU6-327P-201ENST00000516270 127 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 Y_RNA.711-201ENST00000516993 102 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 RNU6-323P-201ENST00000521915 107 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL360085.1-201ENST00000604713 532 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AL162730.1-201ENST00000605734 292 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AC116312.1-201ENST00000606841 314 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AC010378.1-201ENST00000619270 362 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 MIR6852-201ENST00000621699 66 ntBASIC3.52□□□□□ -1.85
DKK3Q9UBP4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DKK3Q9UBP4 MTND5P10-201ENST00000603719 1809 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 ZNF807-201ENST00000328088 1707 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RNU6-1167P-201ENST00000363227 94 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RNU6-738P-201ENST00000384531 106 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RNU6-601P-201ENST00000384540 107 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 SNORD17-201ENST00000390930 237 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 MIR887-201ENST00000401258 79 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RPL21P90-201ENST00000415692 466 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 MTND2P23-201ENST00000422990 651 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RPS24P13-201ENST00000442520 397 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AL360271.2-201ENST00000447710 161 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RPL23AP31-201ENST00000456160 467 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RPS20P22-201ENST00000473700 357 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 UBE2DNL-203ENST00000474922 222 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AL049873.1-201ENST00000480540 376 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RPS4XP22-201ENST00000480755 780 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AL049874.1-201ENST00000489560 388 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 SNORA31.8-201ENST00000516327 108 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 RN7SKP57-201ENST00000517248 293 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AC007458.1-201ENST00000542812 373 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AC006504.6-201ENST00000590142 199 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AC073539.2-201ENST00000597113 165 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DKK3Q9UBP4 OR4G2P-202ENST00000641004 1759 ntBASIC3.51□□□□□ -1.85
DKK3Q9UBP4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 RNU4-35P-201ENST00000362588 141 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 RNU6-266P-201ENST00000364225 107 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 RNU6-805P-201ENST00000365643 106 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 MIR578-201ENST00000384828 96 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 MIR606-201ENST00000384851 96 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 MIR301A-201ENST00000385261 86 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 RNU6-607P-201ENST00000411283 108 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC063979.1-201ENST00000415539 377 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC245054.2-201ENST00000415639 319 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 RPL7P37-201ENST00000425095 738 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AL356867.1-201ENST00000429623 299 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AL645568.3-201ENST00000433683 316 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AL163540.1-201ENST00000485382 386 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 SUMO2P6-201ENST00000505273 288 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC116337.1-201ENST00000509680 687 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 RNU6-1332P-201ENST00000516666 104 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 RNU6-1016P-201ENST00000516689 94 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms