Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP35Q9P2H5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP35Q9P2H5 Y_RNA.324-201ENST00000365165 102 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 RNU6-1280P-201ENST00000365211 107 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 RNU1-100P-201ENST00000365255 165 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 POLHP1-201ENST00000411806 470 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 RPLP0P7-201ENST00000416050 667 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 TRIAP1P1-201ENST00000427062 225 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC006026.2-201ENST00000457376 180 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC116655.1-201ENST00000508324 901 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 HIGD1AP13-201ENST00000509878 289 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 SNORA25.17-201ENST00000517184 124 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC009812.2-201ENST00000517657 457 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC069113.1-201ENST00000517763 267 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC008739.2-201ENST00000597006 317 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC091152.3-201ENST00000604227 325 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AL035413.2-201ENST00000604801 525 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 AC002553.4-201ENST00000616896 331 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.38□□□□□ -1.71
USP35Q9P2H5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP35Q9P2H5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.38□□□□□ -1.71
USP35Q9P2H5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP35Q9P2H5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP35Q9P2H5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC121333.1-201ENST00000567488 2709 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 NDUFB4P5-201ENST00000415445 361 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC016831.2-201ENST00000417179 352 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 OSTCP8-201ENST00000445117 448 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 HIGD1AP2-201ENST00000446367 280 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC092001.1-201ENST00000453012 261 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 HMGN1P18-201ENST00000457642 277 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC092989.1-201ENST00000481235 277 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.37□□□□□ -1.71
USP35Q9P2H5 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC024614.3-201ENST00000637860 256 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP35Q9P2H5 AC007496.3-201ENST00000624987 3443 ntBASIC4.37□□□□□ -1.71
USP35Q9P2H5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP35Q9P2H5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP35Q9P2H5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 RNU6-1303P-201ENST00000364841 107 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 AL512633.1-201ENST00000399931 655 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 AC233279.1-201ENST00000455300 423 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 RNU6-581P-201ENST00000516214 105 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 AL118558.2-201ENST00000556294 238 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 UBL5P2-201ENST00000583788 219 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 VN1R80P-201ENST00000597126 338 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 RMST_3.1-201ENST00000611651 109 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 Z69720.2-201ENST00000624755 279 ntBASIC4.36□□□□□ -1.71
USP35Q9P2H5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP35Q9P2H5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.36□□□□□ -1.71
USP35Q9P2H5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP35Q9P2H5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
USP35Q9P2H5 SNORD56.3-201ENST00000363507 71 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 RNU6-266P-201ENST00000364225 107 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.35□□□□□ -1.71
USP35Q9P2H5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.35□□□□□ -1.71
USP35Q9P2H5 ATG3P1-201ENST00000419507 911 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 PGBD4P6-201ENST00000421501 610 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 PTGES3P4-201ENST00000426243 356 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.35□□□□□ -1.71
USP35Q9P2H5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.35□□□□□ -1.71
USP35Q9P2H5 RPL31P41-201ENST00000477967 372 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 SEM1P1-201ENST00000506694 209 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.35□□□□□ -1.71
USP35Q9P2H5 MIR3945-201ENST00000581853 98 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 AC005261.5-201ENST00000596280 355 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 AC092807.2-201ENST00000609367 243 ntBASIC4.35□□□□□ -1.71
USP35Q9P2H5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP35Q9P2H5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms