Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 U8.2-201ENST00000363156 134 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 U8.3-201ENST00000363321 132 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC092809.3-201ENST00000415453 231 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AL358453.1-201ENST00000422522 250 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC109927.2-201ENST00000506416 303 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AP003392.2-201ENST00000527269 208 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC023050.2-201ENST00000544968 387 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 MTCYBP23-201ENST00000558717 1102 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC092325.1-201ENST00000566449 554 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 MIR3146-201ENST00000580367 79 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AL391001.1-201ENST00000602747 715 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AP000860.1-201ENST00000605250 559 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AL592221.1-201ENST00000605266 382 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AL158042.1-201ENST00000605338 460 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC126118.1-201ENST00000607744 628 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 uc_338.15-201ENST00000615470 191 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 AC092192.1-201ENST00000633154 1018 ntBASIC1.52□□□□□ -2.17
VAPAQ9P0L0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
VAPAQ9P0L0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 RNU6-1010P-201ENST00000362757 107 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 RNU6-1274P-201ENST00000384557 107 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 MIR583-201ENST00000384846 75 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 MIR29C-201ENST00000385231 88 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 RNU11-3P-201ENST00000391111 133 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 MIR1262-201ENST00000408276 93 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 RNU2-48P-201ENST00000410694 191 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 UBE2V1P10-201ENST00000414685 269 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 VN1R36P-201ENST00000414936 291 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC003071.1-201ENST00000451219 789 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AL583843.1-201ENST00000456070 346 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 FCF1P6-201ENST00000456841 595 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 UBE2DNL-203ENST00000474922 222 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC068587.2-201ENST00000478386 781 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC096745.1-201ENST00000509945 370 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 MTCYBP33-201ENST00000575007 1130 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 MIR15A-201ENST00000607334 83 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AL391813.2-201ENST00000609113 322 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 AC004908.3-201ENST00000610248 625 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 FRG1KP-201ENST00000623592 341 ntBASIC1.51□□□□□ -2.17
VAPAQ9P0L0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
VAPAQ9P0L0 ZNF876P-202ENST00000398732 1485 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 RNU4-68P-201ENST00000364314 141 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 RNU6-546P-201ENST00000383991 107 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 RNA5SP465-201ENST00000391195 109 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 RNU2-62P-201ENST00000410868 191 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 snoU109.2-201ENST00000459316 135 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 UBL5P3-201ENST00000475112 231 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 AP005435.4-201ENST00000529514 284 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 AK6P1-201ENST00000540219 478 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 Z82243.1-201ENST00000609432 473 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 uc_338.5-201ENST00000611839 155 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 AC009269.6-201ENST00000621778 588 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
VAPAQ9P0L0 MIR3529-201ENST00000637713 78 ntBASIC1.5□□□□□ -2.17
VAPAQ9P0L0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 RNU6-395P-201ENST00000365662 106 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 SNORA75B-201ENST00000384053 137 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 RNU6-190P-201ENST00000384154 102 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 RNU6-843P-201ENST00000384454 104 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 MIR597-201ENST00000384968 97 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms