Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AC009902.1-201ENST00000519351 183 ntBASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.4□□□□□ -1.87
EHD3Q9NZN3 HMGB1P14-201ENST00000557424 591 ntBASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC093227.2-201ENST00000589357 285 ntBASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC136443.5-201ENST00000603741 370 ntBASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC007938.3-201ENST00000604965 623 ntBASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC011890.2-201ENST00000613393 294 ntBASIC3.4□□□□□ -1.87
EHD3Q9NZN3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.4□□□□□ -1.87
EHD3Q9NZN3 AC007656.2-201ENST00000624902 4547 ntBASIC3.4□□□□□ -1.87
EHD3Q9NZN3 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 RNU6-842P-201ENST00000384269 107 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 SAR1AP2-201ENST00000392696 594 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 RNU6-293P-201ENST00000411259 106 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AL035423.1-201ENST00000420331 213 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC018865.2-201ENST00000423631 129 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 FTH1P25-201ENST00000447665 469 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 RPS3AP46-201ENST00000448352 682 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 SNORD105B-201ENST00000458770 79 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 RPS23P3-201ENST00000470993 430 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC025755.1-201ENST00000521306 278 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 TGIF1P1-201ENST00000558095 802 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC007485.1-201ENST00000616755 206 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 CR392039.5-201ENST00000623201 510 ntBASIC3.39□□□□□ -1.87
EHD3Q9NZN3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EHD3Q9NZN3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 RNA5SP51-201ENST00000364750 119 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 RNU6-741P-201ENST00000383889 107 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 RPL21P17-201ENST00000397467 475 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 MCFD2P1-201ENST00000417812 300 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 PGBD4P6-201ENST00000421501 610 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AC007389.2-201ENST00000434630 306 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL583843.1-201ENST00000456070 346 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 Y_RNA.661-201ENST00000516003 99 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 BNIP3P16-201ENST00000589779 534 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL133393.1-201ENST00000603277 287 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL160281.1-201ENST00000605307 311 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL121917.1-203ENST00000605534 577 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AC039056.2-201ENST00000622261 511 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AC138627.2-201ENST00000624202 601 ntBASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EHD3Q9NZN3 AC068647.1-201ENST00000489539 2265 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 AC008568.2-201ENST00000623862 2313 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
EHD3Q9NZN3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
EHD3Q9NZN3 AC103988.1-201ENST00000566382 2177 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EHD3Q9NZN3 MIR412-201ENST00000362142 91 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-37P-201ENST00000362692 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-11P-201ENST00000364234 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 SNORD14B-201ENST00000364533 90 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-7-201ENST00000364784 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 SNORA62.3-201ENST00000365110 153 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-8-201ENST00000365467 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 AL359837.1-201ENST00000381357 287 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-25P-201ENST00000383873 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-1-201ENST00000383898 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-48P-201ENST00000384161 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-36P-201ENST00000384172 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-4P-201ENST00000384205 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-5P-201ENST00000384238 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-3P-201ENST00000384314 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-16P-201ENST00000384385 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-15P-201ENST00000384534 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-2-201ENST00000384627 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-29P-201ENST00000384637 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-9-201ENST00000384776 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 RNU6-33P-201ENST00000384793 107 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 MIR493-201ENST00000385254 89 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 MIR325-201ENST00000385260 98 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 SYF2P2-201ENST00000417620 583 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 AC243428.1-201ENST00000421099 264 ntBASIC3.37□□□□□ -1.87
EHD3Q9NZN3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.37□□□□□ -1.87
EHD3Q9NZN3 USMG5P1-201ENST00000425964 177 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms