Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AC080125.1-201ENST00000414888 684 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.55□□□□□ -2
NDE1Q9NXR1 RPL7P37-201ENST00000425095 738 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AC005326.1-201ENST00000429197 123 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AC104058.1-201ENST00000448028 297 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.55□□□□□ -2
NDE1Q9NXR1 FABP5P15-201ENST00000453566 214 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.55□□□□□ -2
NDE1Q9NXR1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.55□□□□□ -2
NDE1Q9NXR1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 RNA5SP165-201ENST00000517142 115 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NDE1Q9NXR1 AP002404.1-201ENST00000532005 451 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AC068135.2-201ENST00000569293 1028 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.55□□□□□ -2
NDE1Q9NXR1 AC010525.2-201ENST00000590920 195 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 RBM11P1-201ENST00000604951 799 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AC107294.1-201ENST00000609524 467 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.55□□□□□ -2
NDE1Q9NXR1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NDE1Q9NXR1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
NDE1Q9NXR1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NDE1Q9NXR1 CUL1P1-201ENST00000509510 2425 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AC090740.1-201ENST00000623193 2262 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NDE1Q9NXR1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
NDE1Q9NXR1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.54□□□□□ -2
NDE1Q9NXR1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.54□□□□□ -2
NDE1Q9NXR1 AL139276.1-201ENST00000311910 1001 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
NDE1Q9NXR1 RNA5SP267-201ENST00000364893 126 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 MIR627-201ENST00000384979 97 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 RNU2-29P-201ENST00000410423 189 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 RNU6-387P-201ENST00000411331 105 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AC096664.2-201ENST00000411843 406 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.54□□□□□ -2
NDE1Q9NXR1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.54□□□□□ -2
NDE1Q9NXR1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.54□□□□□ -2
NDE1Q9NXR1 ZNF863P-201ENST00000426746 417 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AC005300.1-201ENST00000428401 373 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.54□□□□□ -2
NDE1Q9NXR1 AC112220.1-201ENST00000434628 355 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.54□□□□□ -2
NDE1Q9NXR1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.54□□□□□ -2
NDE1Q9NXR1 SNRPFP3-201ENST00000457792 225 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.54□□□□□ -2
NDE1Q9NXR1 RNU7-180P-201ENST00000459240 63 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 CCDC34P1-201ENST00000507441 517 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 RNA5SP367-201ENST00000516557 118 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 RNU6-1178P-201ENST00000516674 107 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 BNIP3P6-201ENST00000549284 499 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.54□□□□□ -2
NDE1Q9NXR1 AC106782.4-201ENST00000568264 210 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AC008739.2-201ENST00000597006 317 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AC174048.1-201ENST00000603389 144 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 AL035413.2-201ENST00000604801 525 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
NDE1Q9NXR1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.54□□□□□ -2
NDE1Q9NXR1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.54□□□□□ -2
NDE1Q9NXR1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
NDE1Q9NXR1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.53□□□□□ -2
NDE1Q9NXR1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NDE1Q9NXR1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NDE1Q9NXR1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NDE1Q9NXR1 SNORA38.1-201ENST00000364172 131 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.53□□□□□ -2
NDE1Q9NXR1 Y_RNA.390-201ENST00000383932 102 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 Y_RNA.573-201ENST00000384763 105 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 MIR578-201ENST00000384828 96 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 RNU4-46P-201ENST00000410818 138 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.53□□□□□ -2
NDE1Q9NXR1 RPL30P16-201ENST00000419341 429 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.53□□□□□ -2
NDE1Q9NXR1 AC092047.1-201ENST00000424997 240 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.53□□□□□ -2
NDE1Q9NXR1 HMGB1P31-201ENST00000437242 427 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.53□□□□□ -2
NDE1Q9NXR1 AL590664.1-201ENST00000448065 339 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.53□□□□□ -2
NDE1Q9NXR1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.53□□□□□ -2
NDE1Q9NXR1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.53□□□□□ -2
NDE1Q9NXR1 AC006445.1-201ENST00000491925 405 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 RNU4-29P-201ENST00000515943 174 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 RNU6-143P-201ENST00000516942 93 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 RNU6-1315P-201ENST00000517187 99 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.53□□□□□ -2
NDE1Q9NXR1 AL118558.2-201ENST00000556294 238 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.53□□□□□ -2
NDE1Q9NXR1 AL138889.2-201ENST00000603883 242 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 DUSP12P1-201ENST00000612874 516 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NDE1Q9NXR1 MIR7112-201ENST00000616126 65 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AC002553.4-201ENST00000616896 331 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 uc_338.34-201ENST00000617467 174 ntBASIC2.53□□□□□ -2
NDE1Q9NXR1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.53□□□□□ -2
NDE1Q9NXR1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
NDE1Q9NXR1 MTND4P35-201ENST00000604257 1375 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms