Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL078601.1-201ENST00000444542 271 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 snoU13.23-201ENST00000458863 104 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 RNU6-678P-201ENST00000516832 109 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC079598.5-201ENST00000547460 117 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 HSBP1P1-201ENST00000555205 166 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC012435.1-202ENST00000568772 240 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL031274.2-201ENST00000599419 203 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL031281.1-201ENST00000604049 488 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL670379.10-201ENST00000604330 253 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC105148.1-201ENST00000604961 409 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL670379.9-201ENST00000605428 253 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC005014.3-201ENST00000605985 190 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC108747.1-201ENST00000609508 535 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL365204.3-201ENST00000612448 685 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC022202.1-201ENST00000613515 211 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL773524.1-201ENST00000614065 229 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 RNY4P16-201ENST00000364768 94 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 U3.13-201ENST00000364804 214 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 Y_RNA.302-201ENST00000364997 102 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 RPS20P2-201ENST00000402520 389 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC006366.1-201ENST00000422002 759 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AL022400.1-201ENST00000423946 935 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 MTND1P32-201ENST00000433043 938 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 RPL22P17-201ENST00000438729 315 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 DUXAP8-207ENST00000456786 622 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC117503.1-201ENST00000472241 394 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 RPS3AP22-201ENST00000488297 769 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC018437.1-201ENST00000492214 406 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 HSPE1P23-201ENST00000509838 286 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 SNORA4.4-201ENST00000515921 135 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 RNU6-914P-201ENST00000516749 109 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 RNU6-1315P-201ENST00000517187 99 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC107953.1-201ENST00000522216 297 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 MTND4P33-201ENST00000556706 766 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC112187.2-201ENST00000604345 283 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC013244.3-201ENST00000605614 388 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC107952.2-201ENST00000606048 486 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC022306.3-201ENST00000619930 550 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC138627.2-201ENST00000624202 601 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC017037.3-201ENST00000625016 472 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC006927.4-201ENST00000639187 543 ntBASIC1.69□□□□□ -2.14
TREX1Q9NSU2 AC106754.1-201ENST00000562632 1513 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 Y_RNA.18-201ENST00000362461 102 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 RNU1-72P-201ENST00000362976 153 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC092809.3-201ENST00000415453 231 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC009518.2-201ENST00000418056 731 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC138623.1-201ENST00000418060 216 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC244636.1-201ENST00000421152 228 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC004854.1-201ENST00000440356 349 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 MTND6P13-201ENST00000443510 523 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 RPL23AP63-201ENST00000498752 471 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 MTATP6P9-201ENST00000515039 680 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 SNORA31.23-201ENST00000517219 133 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC025678.1-201ENST00000567861 338 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC121334.2-201ENST00000605387 271 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC087045.1-201ENST00000605856 382 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AL355816.2-201ENST00000610049 647 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.68□□□□□ -2.14
TREX1Q9NSU2 uc_338.12-201ENST00000616344 181 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 ZNF876P-202ENST00000398732 1485 ntBASIC1.68□□□□□ -2.14
TREX1Q9NSU2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.67□□□□□ -2.14
TREX1Q9NSU2 AL356292.1-201ENST00000283110 373 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 Y_RNA.33-201ENST00000362591 102 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RNU6-234P-201ENST00000365229 104 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RNU5E-6P-201ENST00000365574 115 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 Y_RNA.534-201ENST00000384599 112 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 SNORA40C-201ENST00000391285 128 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 FTH1P15-201ENST00000406984 280 ntBASIC1.67□□□□□ -2.14
TREX1Q9NSU2 RNA5SP450-201ENST00000411206 102 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms