Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC002044.1-201ENST00000606707 158 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AL442067.2-201ENST00000614033 363 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AC121333.1-201ENST00000567488 2709 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 U3.12-201ENST00000364498 214 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 RNU6-1280P-201ENST00000365211 107 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 RNU1-100P-201ENST00000365255 165 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 RNU4-26P-201ENST00000410270 107 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AL353678.1-201ENST00000422735 741 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 MRPS10P2-201ENST00000431226 381 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AP004217.1-201ENST00000480579 346 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 SNORA14.1-201ENST00000516113 141 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 Y_RNA.665-201ENST00000516177 98 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 RNU6-581P-201ENST00000516214 105 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 Y_RNA.687-201ENST00000516558 91 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 CYCSP27-201ENST00000527643 293 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AC007151.1-201ENST00000572774 483 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 ATP1B3P1-201ENST00000605365 821 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 UCA1.1-201ENST00000620952 75 ntBASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A13Q9NSD5 Y_RNA.157-201ENST00000363638 102 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 Y_RNA.167-201ENST00000363735 109 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 ATG3P1-201ENST00000419507 911 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 PTGES3P4-201ENST00000426243 356 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AL358075.3-201ENST00000426289 226 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 SAR1AP4-201ENST00000429225 591 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 HIGD1AP2-201ENST00000446367 280 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 BX510359.1-201ENST00000456973 237 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 snoU109.2-201ENST00000459316 135 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 RN7SL601P-201ENST00000471221 293 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 RN7SL633P-201ENST00000488974 297 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC069439.1-201ENST00000494739 167 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 MTCYBP18-201ENST00000501056 747 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC116655.1-201ENST00000508324 901 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC069113.1-201ENST00000517763 267 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC007536.1-201ENST00000533382 349 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC011611.1-201ENST00000552179 197 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC005261.5-201ENST00000596280 355 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC008739.2-201ENST00000597006 317 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AL391813.1-201ENST00000603098 260 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC091152.3-201ENST00000604227 325 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AL160281.1-201ENST00000605307 311 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC018692.3-201ENST00000623929 123 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 Z69720.2-201ENST00000624755 279 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC004944.1-201ENST00000517807 3059 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AP003122.5-201ENST00000527668 3766 ntBASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SLC6A13Q9NSD5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 RNU6-332P-201ENST00000391193 108 ntBASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 AC244505.4-201ENST00000434905 287 ntBASIC2.86□□□□□ -1.95
SLC6A13Q9NSD5 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms