Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU6-851P-201ENST00000384565 107 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RNU6-1179P-201ENST00000384667 107 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 MIR128-1-201ENST00000384921 82 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 SNORA48.2-201ENST00000390926 124 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RNU6-1025P-201ENST00000410629 104 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 POLHP1-201ENST00000411806 470 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 BX682237.1-201ENST00000415016 335 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AL669831.1-202ENST00000428504 417 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RPL23AP83-201ENST00000434984 473 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 GTF2IP13-201ENST00000438487 386 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 USP9YP8-201ENST00000441913 500 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RPL7P12-201ENST00000446719 750 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 FABP5P15-201ENST00000453566 214 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 HMGN1P12-201ENST00000499125 195 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC083906.5-201ENST00000503722 328 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 SCGB1D5P-201ENST00000515134 247 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 Y_RNA.665-201ENST00000516177 98 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 SNORA9.3-201ENST00000516383 129 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 SNORA74D-201ENST00000516404 141 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 RNU6-928P-201ENST00000516876 104 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC107953.1-201ENST00000522216 297 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC243972.3-201ENST00000539655 198 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AL157871.3-201ENST00000557231 293 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 MIR1273C-201ENST00000578669 77 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 MIR548AC-201ENST00000585049 88 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 U2.17-201ENST00000611454 95 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 Y_RNA.804-201ENST00000615262 101 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC104260.1-201ENST00000616660 539 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 MIR6076-201ENST00000617521 113 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC005858.4-201ENST00000623191 700 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 CUL1P1-201ENST00000509510 2425 ntBASIC2.94□□□□□ -1.94
PCDH9Q9HC56 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PCDH9Q9HC56 AC090740.1-201ENST00000623193 2262 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC091564.4-201ENST00000533934 2194 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 FTLP6-201ENST00000355274 422 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RNU6-1252P-201ENST00000363054 104 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 Y_RNA.279-201ENST00000364763 95 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RNU6-767P-201ENST00000384132 107 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AL078595.1-201ENST00000404458 226 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RNU2-68P-201ENST00000410878 191 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RNU6-1148P-201ENST00000410992 104 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RPL7P10-201ENST00000417407 739 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC092047.1-201ENST00000424997 240 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 ZNF863P-201ENST00000426746 417 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 PRPS1P1-201ENST00000445305 876 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RPL30P14-201ENST00000482744 348 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC091951.2-201ENST00000500762 203 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 MTND3P25-201ENST00000509243 135 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC104136.1-201ENST00000512969 394 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RNU2-69P-201ENST00000516061 100 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 RNU6-1314P-201ENST00000517139 104 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDH9Q9HC56 CTHRC1P1-201ENST00000605383 469 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC009994.1-201ENST00000606889 253 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AC009248.2-201ENST00000619826 254 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 FAM35BP-202ENST00000497389 3337 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AP003122.5-201ENST00000527668 3766 ntBASIC2.93□□□□□ -1.94
PCDH9Q9HC56 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 Y_RNA.33-201ENST00000362591 102 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 Y_RNA.72-201ENST00000362894 103 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 RNU6-522P-201ENST00000364497 107 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 RNU6-1303P-201ENST00000364841 107 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 SNORA44-201ENST00000384584 132 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 MIR23A-201ENST00000385245 73 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 EEF1A1P41-201ENST00000414667 207 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 ARL5AP1-201ENST00000418991 388 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 SNRPEP9-201ENST00000436794 238 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 RPL21P2-201ENST00000440049 481 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 GSTA11P-201ENST00000452866 669 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms