Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 RNA5SP502-201ENST00000362694 119 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 RNU6-770P-201ENST00000363929 105 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 RNU6-395P-201ENST00000365662 106 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.483-201ENST00000384380 101 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 RNU6-790P-201ENST00000384479 105 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 HMGN2P8-201ENST00000391458 268 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 SAR1AP2-201ENST00000392696 594 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 MTCO3P19-201ENST00000415864 321 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 RNU6-1037P-201ENST00000459571 107 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.687-201ENST00000516558 91 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 TRAV37-201ENST00000553906 342 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AL157871.3-201ENST00000557231 293 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AC006600.1-201ENST00000572529 153 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 MIR3200-201ENST00000580767 85 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 RNA5SP108-201ENST00000605921 117 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AC103858.2-201ENST00000621471 543 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 U4.6-201ENST00000621618 127 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 ASNSP1-201ENST00000518311 1939 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 UBE2L2-201ENST00000254302 429 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 RNU6-209P-201ENST00000384118 107 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 RNU6-611P-201ENST00000384276 104 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AL513475.1-201ENST00000406602 315 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 MTCO1P39-201ENST00000426148 480 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AL353997.1-201ENST00000432936 108 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 USP9YP7-201ENST00000436723 430 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 NDUFB1P2-201ENST00000449477 176 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 USP9YP32-201ENST00000452432 430 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 IFNWP4-201ENST00000453148 294 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AC133473.1-201ENST00000455173 299 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AC025465.3-201ENST00000510570 311 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AC107016.1-201ENST00000550463 337 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AC026470.2-201ENST00000561492 181 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AL360157.1-201ENST00000565962 87 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 AL159153.1-201ENST00000619688 317 ntBASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
BCAS3Q9H6U6 ZNF299P-201ENST00000406845 1804 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 RNU6-1093P-201ENST00000391194 107 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 Z92545.1-201ENST00000411782 234 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AL590664.1-201ENST00000448065 339 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 CYCSP35-201ENST00000451978 304 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 SUMO1P2-201ENST00000452524 304 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AC084851.1-201ENST00000529105 249 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AC007375.1-201ENST00000554513 578 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 MIR3128-201ENST00000581957 66 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 MIR5195-201ENST00000583555 115 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AC006077.1-201ENST00000604746 343 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 SNORD39.4-201ENST00000620099 78 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AC093908.1-201ENST00000623125 8092 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 Z99571.1-201ENST00000636677 394 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 AL356489.2-201ENST00000566968 3528 ntBASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BCAS3Q9H6U6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms