Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC019193.3-201ENST00000609144 554 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AC107294.3-201ENST00000609211 526 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AL355365.1-201ENST00000616480 294 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 uc_338.22-201ENST00000622722 187 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 Z83843.1-201ENST00000604070 3685 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS16Q9H269 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS16Q9H269 MTND5P27-201ENST00000428871 1720 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VPS16Q9H269 RNU6-254P-201ENST00000363377 107 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 Y_RNA.197-201ENST00000364004 102 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS16Q9H269 RNU6-140P-201ENST00000384566 108 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 SNORA46-201ENST00000384762 135 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 RNU6-550P-201ENST00000391057 101 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 MTCYBP4-201ENST00000401524 249 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS16Q9H269 AC113618.1-201ENST00000416747 285 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS16Q9H269 SKA2P1-201ENST00000425592 390 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AL592045.1-201ENST00000429867 352 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AC107399.1-201ENST00000451226 265 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS16Q9H269 RN7SL75P-201ENST00000461926 281 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 RPL30P14-201ENST00000482744 348 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AC006445.2-201ENST00000510061 472 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 OR11H5P-201ENST00000554039 926 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS16Q9H269 MIR3609-201ENST00000582661 80 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AC010205.1-201ENST00000616668 449 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS16Q9H269 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS16Q9H269 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS16Q9H269 AL512643.1-201ENST00000635735 524 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 Z99571.1-201ENST00000636677 394 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 AC093831.2-201ENST00000624393 3427 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS16Q9H269 MAPK10-362ENST00000641864 4484 ntBASIC3.47□□□□□ -1.85
VPS16Q9H269 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS16Q9H269 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS16Q9H269 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS16Q9H269 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.46□□□□□ -1.85
VPS16Q9H269 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS16Q9H269 AL079305.1-201ENST00000623159 3008 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS16Q9H269 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS16Q9H269 SNORD113-7-201ENST00000363762 77 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 Y_RNA.187-201ENST00000363918 113 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RNU6-217P-201ENST00000384164 104 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 POLHP1-201ENST00000411806 470 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RPL37P10-201ENST00000412884 288 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AC074085.1-201ENST00000413598 418 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS16Q9H269 AL160275.3-201ENST00000423876 471 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RPS12P18-201ENST00000442381 270 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AL137792.2-201ENST00000443484 235 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AC104058.1-201ENST00000448028 297 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RPL21P10-201ENST00000463521 490 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RN7SL293P-201ENST00000481765 281 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS16Q9H269 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS16Q9H269 AC021146.2-201ENST00000504736 556 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RN7SKP24-201ENST00000515888 284 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RNA5SP380-201ENST00000517190 98 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 RNA5SP454-201ENST00000517231 127 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.46□□□□□ -1.86
VPS16Q9H269 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS16Q9H269 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS16Q9H269 AC022634.1-201ENST00000520765 532 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS16Q9H269 AP000763.2-201ENST00000540641 163 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS16Q9H269 MIR4790-201ENST00000577799 79 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AC092747.3-201ENST00000603769 301 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 AL138880.2-201ENST00000616214 239 ntBASIC3.46□□□□□ -1.86
VPS16Q9H269 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS16Q9H269 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS16Q9H269 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
VPS16Q9H269 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS16Q9H269 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS16Q9H269 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.46□□□□□ -1.86
VPS16Q9H269 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS16Q9H269 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS16Q9H269 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
VPS16Q9H269 MTND5P16-201ENST00000460269 1703 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS16Q9H269 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS16Q9H269 Y_RNA.133-201ENST00000363428 110 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 RNU6-1188P-201ENST00000363795 107 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 RNU6-82P-201ENST00000363970 107 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 RNU6-1035P-201ENST00000384477 107 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS16Q9H269 SNRPEP9-201ENST00000436794 238 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 FABP5P14-201ENST00000437273 393 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 RPS15AP27-201ENST00000449183 343 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 CECR9-201ENST00000453421 199 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 RPL7P42-201ENST00000481005 679 ntBASIC3.45□□□□□ -1.86
VPS16Q9H269 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms