Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MIR1302-8-201ENST00000408342 128 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 MTND2P18-201ENST00000419962 1030 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 ISCA1P6-201ENST00000427740 390 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AL353706.1-201ENST00000436728 494 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 IFNA11P-201ENST00000446352 526 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AL033528.1-201ENST00000453780 140 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 MTCYBP1-201ENST00000454315 1119 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 snoU109.2-201ENST00000459316 135 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 SNORA59A-201ENST00000459326 152 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 snoU109.1-201ENST00000459339 135 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC090515.1-201ENST00000465295 476 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 MTND3P7-201ENST00000474435 343 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 MED28P2-201ENST00000475771 317 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC126389.1-201ENST00000477436 290 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC116562.3-201ENST00000506136 177 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC117522.2-201ENST00000510049 657 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AF213884.2-201ENST00000510417 903 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC118465.1-201ENST00000513820 1271 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AP001646.1-201ENST00000527936 915 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC068587.5-201ENST00000528506 175 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC087883.1-201ENST00000551882 391 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC027176.1-201ENST00000560204 514 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AL138963.2-201ENST00000605137 226 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC068276.1-201ENST00000605793 379 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 AC093648.1-201ENST00000623546 606 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
DDX47Q9H0S4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AC138393.1-203ENST00000327086 343 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 RNU6-858P-201ENST00000362436 107 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 RNU6-942P-201ENST00000363002 107 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 RNU6-72P-201ENST00000384285 79 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AL049545.1-201ENST00000401856 572 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AL360271.2-201ENST00000447710 161 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AL139109.1-201ENST00000455491 297 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 SNORD42A-201ENST00000459584 64 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AP000889.1-201ENST00000530968 660 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 MIR4672-201ENST00000583126 81 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AC245884.12-201ENST00000615364 59 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 U6.42-201ENST00000618440 107 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AC138649.3-201ENST00000622154 254 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AL359740.1-201ENST00000624340 592 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 AL136360.1-201ENST00000503377 1900 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX47Q9H0S4 ZNF658B-202ENST00000615961 3375 ntBASIC2.32□□□□□ -2.04
DDX47Q9H0S4 FARSBP1-201ENST00000435808 1778 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 SNORA51.11-201ENST00000384442 131 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 RNY3P10-201ENST00000384764 102 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 RNA5SP111-201ENST00000411386 101 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 HMGB3P2-201ENST00000411913 584 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 MTND3P17-201ENST00000416968 344 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 MTCYBP5-201ENST00000423752 1135 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 UBE2DNL-203ENST00000474922 222 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AC068781.1-201ENST00000488231 618 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 RNU4-29P-201ENST00000515943 174 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 RNU6-685P-201ENST00000517088 95 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 RPL7P20-201ENST00000520308 745 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AP004607.1-201ENST00000524456 203 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 FAM92A1P1-201ENST00000528023 890 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms