Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 TRAV37-201ENST00000553906 342 ntBASIC3.34□□□□□ -1.87
CIPCQ9C0C6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.34□□□□□ -1.87
CIPCQ9C0C6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
CIPCQ9C0C6 MTCO3P13-201ENST00000577757 781 ntBASIC3.34□□□□□ -1.87
CIPCQ9C0C6 MIR5004-201ENST00000579078 107 ntBASIC3.34□□□□□ -1.87
CIPCQ9C0C6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.34□□□□□ -1.87
CIPCQ9C0C6 uc_338.1-201ENST00000612113 180 ntBASIC3.34□□□□□ -1.87
CIPCQ9C0C6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.34□□□□□ -1.87
CIPCQ9C0C6 AL669831.3-213ENST00000636676 183 ntBASIC3.34□□□□□ -1.87
CIPCQ9C0C6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CIPCQ9C0C6 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.88
CIPCQ9C0C6 AC008568.2-201ENST00000623862 2313 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC005183.1-201ENST00000603687 1979 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RNU1-70P-201ENST00000362618 164 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 Y_RNA.197-201ENST00000364004 102 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RNA5SP189-201ENST00000364920 115 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RNU6-214P-201ENST00000384130 107 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 SNORA75.4-201ENST00000391278 119 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RNU6-1025P-201ENST00000410629 104 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 Y_RNA.646-201ENST00000410980 101 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 GPM6BP2-201ENST00000432046 144 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 VDAC1P3-201ENST00000434069 851 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 PIGFP3-201ENST00000441918 722 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 GPM6BP1-201ENST00000446387 144 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RPL9P32-201ENST00000464118 620 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC109925.1-201ENST00000478069 331 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC011005.2-201ENST00000487324 359 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC096745.1-201ENST00000509945 370 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC026782.1-201ENST00000512952 449 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RNA5SP290-201ENST00000517133 127 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC069113.1-201ENST00000517763 267 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC009902.1-201ENST00000519351 183 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AL360085.1-201ENST00000604713 532 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 ELOCP5-201ENST00000604924 333 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 RNU6-85P-201ENST00000605989 107 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 AL162274.2-201ENST00000614406 332 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 ATP5A1P2-202ENST00000616464 443 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.33□□□□□ -1.88
CIPCQ9C0C6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CIPCQ9C0C6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 Y_RNA.324-201ENST00000365165 102 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 Y_RNA.445-201ENST00000384168 102 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 RNU6-328P-201ENST00000390887 106 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AC096664.2-201ENST00000411843 406 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AL592148.1-201ENST00000413568 445 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 MTND2P23-201ENST00000422990 651 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 MTND4P19-201ENST00000446659 478 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 CECR9-201ENST00000453421 199 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 RN7SL863P-201ENST00000462370 296 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AC090096.1-201ENST00000489168 390 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 MIR892C-201ENST00000516410 77 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 CYP2C61P-201ENST00000604072 290 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AP000654.2-201ENST00000605633 586 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 RMST_8.1-201ENST00000610287 165 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 uc_338.22-201ENST00000622722 187 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 MTND5P19-201ENST00000424872 1794 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CIPCQ9C0C6 AC058791.1-201ENST00000608412 3198 ntBASIC3.32□□□□□ -1.88
CIPCQ9C0C6 MTND5P10-201ENST00000603719 1809 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 SNORD62.1-201ENST00000362541 86 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 Y_RNA.31-201ENST00000362574 102 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 RNU6-384P-201ENST00000364900 104 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CIPCQ9C0C6 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 Y_RNA.473-201ENST00000384333 102 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 RNU6-306P-201ENST00000384617 107 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 SNORD73A-201ENST00000386062 65 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 Z98941.1-201ENST00000407764 100 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.31□□□□□ -1.88
CIPCQ9C0C6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.31□□□□□ -1.88
CIPCQ9C0C6 AL590383.1-201ENST00000428602 75 ntBASIC3.31□□□□□ -1.88
CIPCQ9C0C6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms