Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AC091144.1-201ENST00000519573 138 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 IGLV3-26-201ENST00000520756 302 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AP000889.1-201ENST00000530968 660 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AL138825.1-201ENST00000618587 192 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 UCA1.1-201ENST00000620952 75 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 RNU4-9P-201ENST00000364951 139 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 RNU1-115P-201ENST00000365329 160 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 RNU6-622P-201ENST00000384272 103 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 EI24P2-201ENST00000397776 1076 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.605-201ENST00000410577 105 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 MCFD2P1-201ENST00000417812 300 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 AC078809.1-201ENST00000427601 140 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 AL136097.1-201ENST00000456945 913 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 RPL22P13-201ENST00000493291 347 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 RNA5SP519-201ENST00000516480 119 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 AC016256.1-201ENST00000547971 354 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 RPS15AP11-201ENST00000594193 385 ntBASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAIPQ9BWF2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAIPQ9BWF2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRAIPQ9BWF2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
TRAIPQ9BWF2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.65□□□□□ -1.66
TRAIPQ9BWF2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
TRAIPQ9BWF2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
TRAIPQ9BWF2 AC092268.1-201ENST00000342691 405 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 RNU6-212P-201ENST00000362642 104 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 RNU4-56P-201ENST00000364700 142 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 MIR606-201ENST00000384851 96 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 snosnR66.1-201ENST00000391095 99 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 RNU4-6P-201ENST00000410804 122 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 RPL21P40-201ENST00000428586 483 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 COX6B1P7-201ENST00000430845 235 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC244670.1-201ENST00000436879 112 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC079354.2-201ENST00000453523 154 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 RPL30P10-201ENST00000488148 337 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC021146.2-201ENST00000504736 556 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC092447.9-201ENST00000603395 144 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AL160290.3-201ENST00000604869 165 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC112484.5-201ENST00000624189 228 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AC110079.1-202ENST00000635213 138 ntBASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAIPQ9BWF2 AP001486.2-201ENST00000561652 5113 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AL353743.1-202ENST00000431724 1695 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 SNORD32A-201ENST00000364805 84 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 RNU6-1286P-201ENST00000383871 107 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 SNORA37-201ENST00000384504 129 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 RPL23AP95-201ENST00000426806 265 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AC105758.1-201ENST00000506038 399 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 Y_RNA.706-201ENST00000516933 99 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AC060766.3-201ENST00000591442 263 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AC012493.2-201ENST00000595083 291 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 Z98200.1-201ENST00000607298 470 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AC100812.1-201ENST00000607622 580 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 MIR6867-201ENST00000610636 67 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AC137590.2-201ENST00000619709 240 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 AC119674.1-207ENST00000641355 633 ntBASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAIPQ9BWF2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AC010300.1-201ENST00000600671 5134 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 SPRR2C-201ENST00000290702 219 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 RNU1-15P-201ENST00000353977 144 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 U3.13-201ENST00000364804 214 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AL138885.1-201ENST00000405921 675 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 RN7SKP61-201ENST00000410642 295 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AL358232.1-201ENST00000448030 501 ntBASIC4.63□□□□□ -1.67
TRAIPQ9BWF2 AP001324.2-201ENST00000461163 319 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms