Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 Y_RNA.356-201ENST00000365475 113 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 CYCSP33-201ENST00000414485 327 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 PDCL2P1-201ENST00000419302 352 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 HMGB1P9-201ENST00000429856 646 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 HMGN2P20-201ENST00000437531 273 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 RPS12P18-201ENST00000442381 270 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 MTATP6P7-201ENST00000453315 681 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC008549.1-201ENST00000512900 643 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 RNU6-1069P-201ENST00000516612 133 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 RNU6-1332P-201ENST00000516666 104 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 RNU6-256P-201ENST00000516747 97 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC025423.5-201ENST00000550230 219 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 NACAP3-201ENST00000552100 481 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 SCOCP1-201ENST00000554676 349 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 MIR3942-201ENST00000585264 109 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 LARP7P1-201ENST00000605576 316 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 RNU6-85P-201ENST00000605989 107 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AL022345.1-201ENST00000607292 135 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 RMST_8.1-201ENST00000610287 165 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 RMST_7.1-201ENST00000621935 268 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AL353746.1-201ENST00000566293 6881 ntBASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PAAF1Q9BRP4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 SRP72P2-201ENST00000344851 1979 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 MIR423-201ENST00000362201 94 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU6-778P-201ENST00000363269 103 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 SNORD14B-201ENST00000364533 90 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU6-214P-201ENST00000384130 107 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU6-198P-201ENST00000384258 104 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU2-3P-201ENST00000410144 191 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 VN1R36P-201ENST00000414936 291 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 MRPL50P4-201ENST00000446432 475 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC010099.1-201ENST00000455434 375 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 BTF3P15-201ENST00000455606 336 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 MTND1P11-201ENST00000456661 876 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 snoU109.2-201ENST00000459316 135 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU7-66P-201ENST00000459469 62 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU7-138P-201ENST00000459479 64 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC104472.2-201ENST00000469035 601 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC011005.2-201ENST00000487324 359 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RPS29P20-201ENST00000489592 171 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC103851.1-201ENST00000506833 274 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU6-864P-201ENST00000516256 108 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU6-703P-201ENST00000516946 107 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RN7SKP272-201ENST00000516988 232 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 SNORA25.17-201ENST00000517184 124 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC104027.1-201ENST00000521887 300 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AP000889.2-201ENST00000532684 490 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 LINC00933-203ENST00000559812 219 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 OR1M4P-201ENST00000589199 287 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 MIR7106-201ENST00000612419 65 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AL161629.2-201ENST00000615347 275 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RMST_4.1-201ENST00000616886 107 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC007318.2-201ENST00000620999 243 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 TPTEP1-208ENST00000636884 213 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 U6.98-201ENST00000637157 84 ntBASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PAAF1Q9BRP4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms