Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS1Q99742 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS1Q99742 AC123912.5-201ENST00000605470 343 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 AC069200.1-201ENST00000609511 323 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS1Q99742 SCARNA4-202ENST00000625402 129 ntBASIC3.08□□□□□ -1.92
NPAS1Q99742 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.08□□□□□ -1.92
NPAS1Q99742 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS1Q99742 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPAS1Q99742 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.07□□□□□ -1.92
NPAS1Q99742 RNU6-527P-201ENST00000363425 104 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 RNU1-105P-201ENST00000363470 161 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 RNA5SP50-201ENST00000363731 107 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 SNORA14A-201ENST00000364773 135 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 Z98749.2-208ENST00000381646 500 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 MIR767-201ENST00000390228 109 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 RNU2-49P-201ENST00000410666 184 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 NCOR1P3-201ENST00000420479 303 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.07□□□□□ -1.92
NPAS1Q99742 HMGB1P18-201ENST00000438801 619 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.07□□□□□ -1.92
NPAS1Q99742 HMGN2P10-201ENST00000448085 265 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AC091179.1-201ENST00000461606 579 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.07□□□□□ -1.92
NPAS1Q99742 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.07□□□□□ -1.92
NPAS1Q99742 AC008549.1-201ENST00000512900 643 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 RNU6-566P-201ENST00000516790 107 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 RNU6-1088P-201ENST00000516850 104 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AC010186.2-204ENST00000537668 439 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.07□□□□□ -1.92
NPAS1Q99742 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.07□□□□□ -1.92
NPAS1Q99742 AL355877.2-201ENST00000603670 358 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AC024220.1-201ENST00000603675 484 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 LARP7P1-201ENST00000605576 316 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 MIR7851-201ENST00000610611 160 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AL355365.1-201ENST00000616480 294 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AC012314.7-201ENST00000619693 93 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 MIR6075-201ENST00000620782 95 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 AL133216.2-202ENST00000634512 349 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NPAS1Q99742 AC004944.1-201ENST00000517807 3059 ntBASIC3.07□□□□□ -1.92
NPAS1Q99742 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPAS1Q99742 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 RNU1-33P-201ENST00000364249 162 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 Y_RNA.301-201ENST00000364990 103 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 SNORD116-11-201ENST00000383882 92 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 MT-TD-201ENST00000387419 68 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.06□□□□□ -1.92
NPAS1Q99742 AC107399.1-201ENST00000451226 265 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 CYCSP35-201ENST00000451978 304 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 RPL23AP49-201ENST00000492925 468 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 AC116655.1-201ENST00000508324 901 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.06□□□□□ -1.92
NPAS1Q99742 AC096745.1-201ENST00000509945 370 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.06□□□□□ -1.92
NPAS1Q99742 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.06□□□□□ -1.92
NPAS1Q99742 AP004607.1-201ENST00000524456 203 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.06□□□□□ -1.92
NPAS1Q99742 AC007151.1-201ENST00000572774 483 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 AL138726.1-201ENST00000614873 333 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 FAM157A-202ENST00000615155 405 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 MIR7975-201ENST00000619350 68 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 Z69720.2-201ENST00000624755 279 ntBASIC3.06□□□□□ -1.92
NPAS1Q99742 MFSD8-233ENST00000641482 4860 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
NPAS1Q99742 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
NPAS1Q99742 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 RNU1-70P-201ENST00000362618 164 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 Y_RNA.212-201ENST00000364177 102 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 Y_RNA.263-201ENST00000364659 114 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 RNVU1-14-201ENST00000384770 164 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AL078595.1-201ENST00000404458 226 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 MIR548F5-201ENST00000408421 86 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.05□□□□□ -1.92
NPAS1Q99742 AC074085.1-201ENST00000413598 418 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPAS1Q99742 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.05□□□□□ -1.92
NPAS1Q99742 AC245291.1-201ENST00000419501 328 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 SNAP23P1-201ENST00000433229 246 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AL353705.1-201ENST00000433468 480 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AL161651.1-201ENST00000440882 223 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 RPL32P28-201ENST00000443577 397 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.05□□□□□ -1.92
NPAS1Q99742 RPL21P10-201ENST00000463521 490 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 RPL23AP45-201ENST00000476406 468 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.05□□□□□ -1.92
NPAS1Q99742 AK3P2-201ENST00000507976 429 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AC008526.1-201ENST00000509149 338 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 MTND3P22-201ENST00000510932 243 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AC092436.3-201ENST00000511788 257 ntBASIC3.05□□□□□ -1.92
NPAS1Q99742 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.05□□□□□ -1.92
NPAS1Q99742 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms