Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MIR369-201ENST00000362155 70 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 SNORD42.2-201ENST00000365570 69 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RNU6-933P-201ENST00000384424 107 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RNU6-790P-201ENST00000384479 105 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RNU6-658P-201ENST00000384606 106 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 MIR7-3-201ENST00000384898 110 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 MIR559-201ENST00000385188 96 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RPS4XP3-201ENST00000398541 413 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RPL5P18-201ENST00000406671 891 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 MIR548P-201ENST00000408336 84 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RPL26P27-201ENST00000414397 437 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC093151.1-201ENST00000427711 313 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 MTCYBP6-201ENST00000441810 138 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AL031274.1-201ENST00000450334 232 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RPS4XP2-201ENST00000458402 793 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.639-201ENST00000458981 102 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC097473.1-201ENST00000508142 408 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC026782.1-201ENST00000512952 449 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RNU6-307P-201ENST00000516743 106 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AP003072.1-201ENST00000531740 145 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC078795.3-201ENST00000602913 472 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC024220.1-201ENST00000603675 484 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC123912.5-201ENST00000605470 343 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AP000654.2-201ENST00000605633 586 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 U3.45-201ENST00000607547 219 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC002076.2-201ENST00000617362 122 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 MIR6076-201ENST00000617521 113 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC244517.12-201ENST00000623581 663 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 AC032011.1-201ENST00000611703 1549 ntBASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.151-201ENST00000363566 112 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.197-201ENST00000364004 102 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 RNU6-306P-201ENST00000384617 107 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 RNU6-310P-201ENST00000384655 107 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 MIR183-201ENST00000384958 110 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 MIR517A-201ENST00000385001 87 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 SNORD17-201ENST00000390930 237 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.594-201ENST00000410373 140 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AL030996.1-201ENST00000411430 235 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 SNORD56-201ENST00000413522 71 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC236972.1-201ENST00000433225 199 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC006026.2-201ENST00000457376 180 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 SNORD5.1-201ENST00000458800 75 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 RNU7-187P-201ENST00000458985 68 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.631-201ENST00000459607 101 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC008571.1-201ENST00000467232 300 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC128713.1-201ENST00000471495 306 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC021205.2-201ENST00000480069 347 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 RN7SL293P-201ENST00000481765 281 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC006445.2-201ENST00000510061 472 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 SNORA70.19-201ENST00000516717 90 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 NACAP3-201ENST00000552100 481 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 MIR3609-201ENST00000582661 80 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC009229.3-201ENST00000608056 282 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC069200.1-201ENST00000609511 323 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC019176.2-201ENST00000611579 315 ntBASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTHRC1Q96CG8 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.89
CTHRC1Q96CG8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTHRC1Q96CG8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms