Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC073464.1-201ENST00000429823 534 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AC112220.1-201ENST00000434628 355 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AL671855.1-201ENST00000446875 1203 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AP000852.1-201ENST00000472460 573 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 HMGB1P29-201ENST00000505659 499 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 SNORA43.2-201ENST00000516652 128 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AC109329.1-201ENST00000518744 317 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AL133241.1-201ENST00000556832 487 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AC078795.2-201ENST00000602835 1252 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AL121917.1-203ENST00000605534 577 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 MIR6075-201ENST00000620782 95 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.59□□□□□ -2
VPS33AQ96AX1 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
VPS33AQ96AX1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.58□□□□□ -2
VPS33AQ96AX1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.58□□□□□ -2
VPS33AQ96AX1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.58□□□□□ -2
VPS33AQ96AX1 Y_RNA.159-201ENST00000363674 87 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 RNA5SP125-201ENST00000364843 120 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 MIR34B-201ENST00000385076 84 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 RNU2-29P-201ENST00000410423 189 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.58□□□□□ -2
VPS33AQ96AX1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.58□□□□□ -2
VPS33AQ96AX1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.58□□□□□ -2
VPS33AQ96AX1 AL669831.1-202ENST00000428504 417 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 GTF2IP13-201ENST00000438487 386 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.58□□□□□ -2
VPS33AQ96AX1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.58□□□□□ -2
VPS33AQ96AX1 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
VPS33AQ96AX1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.58□□□□□ -2
VPS33AQ96AX1 AC117522.2-201ENST00000510049 657 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.58□□□□□ -2
VPS33AQ96AX1 SNORA25.11-201ENST00000515935 105 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 RNU6-1178P-201ENST00000516674 107 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 AC090136.1-201ENST00000520009 240 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
VPS33AQ96AX1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 AC060766.3-201ENST00000591442 263 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.58□□□□□ -2
VPS33AQ96AX1 MIR5739-201ENST00000619803 80 ntBASIC2.58□□□□□ -2
VPS33AQ96AX1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
VPS33AQ96AX1 RNU1-72P-201ENST00000362976 153 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 SNORA18.3-201ENST00000384122 132 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RNU6-622P-201ENST00000384272 103 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 SNORD116-20-201ENST00000384529 92 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
VPS33AQ96AX1 Y_RNA.582-201ENST00000391023 95 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RNA5SP210-201ENST00000391034 120 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 GSTA9P-201ENST00000406231 611 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 BTF3P7-201ENST00000407097 488 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RNU2-9P-201ENST00000410194 145 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RNU2-63P-201ENST00000410792 194 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.57□□□□□ -2
VPS33AQ96AX1 OR9R1P-201ENST00000412200 877 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 CYCSP33-201ENST00000414485 327 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.57□□□□□ -2
VPS33AQ96AX1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.57□□□□□ -2
VPS33AQ96AX1 EIF4EP4-201ENST00000424916 578 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC092017.2-201ENST00000427600 362 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AL139132.1-201ENST00000431587 344 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.57□□□□□ -2
VPS33AQ96AX1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.57□□□□□ -2
VPS33AQ96AX1 AC073901.1-201ENST00000462471 408 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC006512.1-201ENST00000468816 291 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RPS3AP17-201ENST00000472594 777 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC079140.5-201ENST00000507882 310 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AF213884.2-201ENST00000510417 903 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC091133.4-201ENST00000511142 308 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AP005902.1-201ENST00000521358 186 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.57□□□□□ -2
VPS33AQ96AX1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
VPS33AQ96AX1 PSMA3P-201ENST00000555485 635 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.57□□□□□ -2
VPS33AQ96AX1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.57□□□□□ -2
VPS33AQ96AX1 AL161756.2-201ENST00000604597 246 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC008536.2-201ENST00000607284 349 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AC093788.1-201ENST00000609356 927 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 U4atac.1-201ENST00000618345 95 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 RMST_7.1-201ENST00000621935 268 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 AP003400.5-201ENST00000624827 617 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.57□□□□□ -2
VPS33AQ96AX1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS33AQ96AX1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS33AQ96AX1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VPS33AQ96AX1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
VPS33AQ96AX1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
VPS33AQ96AX1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.56□□□□□ -2
VPS33AQ96AX1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms