Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RNY3P14-201ENST00000384309 102 ntBASIC0.09□□□□□ -2.4
USP9XQ93008 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
USP9XQ93008 RPL21P32-201ENST00000419877 477 ntBASIC0.09□□□□□ -2.4
USP9XQ93008 ZNF863P-201ENST00000426746 417 ntBASIC0.09□□□□□ -2.4
USP9XQ93008 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.09□□□□□ -2.4
USP9XQ93008 AP001893.2-201ENST00000526949 202 ntBASIC0.09□□□□□ -2.4
USP9XQ93008 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.09□□□□□ -2.4
USP9XQ93008 OR1M4P-201ENST00000589199 287 ntBASIC0.09□□□□□ -2.4
USP9XQ93008 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
USP9XQ93008 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.08□□□□□ -2.4
USP9XQ93008 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
USP9XQ93008 AP003122.4-201ENST00000530980 758 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.08□□□□□ -2.4
USP9XQ93008 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.08□□□□□ -2.4
USP9XQ93008 MIR5093-201ENST00000583199 100 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 FAM60CP-201ENST00000591086 664 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
USP9XQ93008 RNU6-338P-201ENST00000383888 105 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 HNRNPDP2-201ENST00000406475 478 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.08□□□□□ -2.4
USP9XQ93008 AC092634.6-201ENST00000418558 192 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.08□□□□□ -2.4
USP9XQ93008 RPL36AP53-201ENST00000432891 316 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.08□□□□□ -2.4
USP9XQ93008 MTCO3P45-201ENST00000443036 613 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 ARPC3P5-201ENST00000448802 534 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 HMGB1P22-201ENST00000505315 124 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.08□□□□□ -2.4
USP9XQ93008 AC107953.1-201ENST00000522216 297 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 AP004371.1-201ENST00000525240 214 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.08□□□□□ -2.4
USP9XQ93008 HSPE1P7-201ENST00000604681 321 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 PART1_2.1-201ENST00000612397 250 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 AC018755.4-201ENST00000619715 454 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 FARSBP1-201ENST00000435808 1778 ntBASIC0.08□□□□□ -2.4
USP9XQ93008 Y_RNA.117-201ENST00000363294 101 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
USP9XQ93008 USP9YP21-201ENST00000420603 432 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.07□□□□□ -2.4
USP9XQ93008 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.07□□□□□ -2.4
USP9XQ93008 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.07□□□□□ -2.4
USP9XQ93008 MTND2P13-201ENST00000577438 1039 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 AC004241.3-201ENST00000611728 517 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 RNU6-1155P-201ENST00000363554 107 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 Y_RNA.498-201ENST00000384460 102 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.07□□□□□ -2.4
USP9XQ93008 BX248409.1-201ENST00000455497 255 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.07□□□□□ -2.4
USP9XQ93008 ACA64.5-201ENST00000516207 127 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.07□□□□□ -2.4
USP9XQ93008 AC087685.1-201ENST00000587507 141 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
USP9XQ93008 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.07□□□□□ -2.4
USP9XQ93008 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
USP9XQ93008 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.07□□□□□ -2.4
USP9XQ93008 BTF3P11-201ENST00000426582 477 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 HSPE1P9-201ENST00000440046 311 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AL096803.2-201ENST00000450032 677 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AC002350.1-201ENST00000490759 375 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.06□□□□□ -2.4
USP9XQ93008 AC093677.1-201ENST00000514414 678 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 RNA5SP461-201ENST00000516451 104 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 RNA5SP404-201ENST00000517118 132 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.06□□□□□ -2.4
USP9XQ93008 SNRPGP16-201ENST00000533275 226 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AC110792.4-201ENST00000609843 298 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AL512506.2-201ENST00000624472 458 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AC009950.2-201ENST00000636548 183 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 MTND4P16-201ENST00000466108 1367 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.06□□□□□ -2.4
USP9XQ93008 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.06□□□□□ -2.4
USP9XQ93008 AC093106.2-201ENST00000428212 385 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AL512844.2-201ENST00000433990 593 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.06□□□□□ -2.4
USP9XQ93008 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.06□□□□□ -2.4
USP9XQ93008 AC244505.3-201ENST00000454598 187 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.06□□□□□ -2.4
USP9XQ93008 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.06□□□□□ -2.4
USP9XQ93008 AC004062.1-201ENST00000509926 645 ntBASIC0.06□□□□□ -2.4
USP9XQ93008 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.06□□□□□ -2.4
USP9XQ93008 AC016716.1-201ENST00000265882 708 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 SNORA68.1-201ENST00000364537 132 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 RNU6-1197P-201ENST00000391183 107 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.05□□□□□ -2.4
USP9XQ93008 AF213884.2-201ENST00000510417 903 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.05□□□□□ -2.4
USP9XQ93008 AC024405.2-202ENST00000532731 184 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AC011260.1-201ENST00000578420 472 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.05□□□□□ -2.4
USP9XQ93008 AC105224.1-201ENST00000587055 421 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AC040174.2-201ENST00000602701 465 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AL121992.2-201ENST00000606262 256 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 RNU6-1097P-201ENST00000363586 107 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AL136372.1-201ENST00000403060 228 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 AC098614.2-201ENST00000426040 255 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.05□□□□□ -2.4
USP9XQ93008 U8.21-201ENST00000459536 136 ntBASIC0.05□□□□□ -2.4
USP9XQ93008 HMGB1P36-201ENST00000487709 576 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms