Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-847P-201ENST00000411115 108 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 CYCSP19-201ENST00000411715 316 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF1Q92994 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF1Q92994 EIF4EP2-201ENST00000422816 654 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF1Q92994 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF1Q92994 AC073910.1-201ENST00000445047 438 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 SLC25A15P5-201ENST00000508033 253 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 RNU6-1073P-201ENST00000517182 106 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.23□□□□□ -1.73
BRF1Q92994 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF1Q92994 MIR5696-201ENST00000578474 85 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 MIR5188-201ENST00000583467 113 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.23□□□□□ -1.73
BRF1Q92994 AC138627.2-201ENST00000624202 601 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
BRF1Q92994 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF1Q92994 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF1Q92994 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF1Q92994 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF1Q92994 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
BRF1Q92994 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF1Q92994 RNA5SP124-201ENST00000362739 110 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 MIR3074-201ENST00000384885 81 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 MIR1183-201ENST00000408856 89 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.22□□□□□ -1.73
BRF1Q92994 AL117339.3-201ENST00000418733 162 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.22□□□□□ -1.73
BRF1Q92994 AC006989.1-201ENST00000427212 131 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AC092573.2-201ENST00000434546 243 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AL583843.1-201ENST00000456070 346 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 RPL23AP45-201ENST00000476406 468 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 FO393415.2-201ENST00000480085 343 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 RPL31P13-201ENST00000484151 370 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AC114801.2-201ENST00000503825 781 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 Y_RNA.687-201ENST00000516558 91 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 SNORA70.18-201ENST00000516696 98 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 Y_RNA.715-201ENST00000517082 110 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AC109479.2-201ENST00000517842 174 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AC025755.1-201ENST00000521306 278 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AC131281.1-201ENST00000522984 164 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 MIR5701-3-201ENST00000578890 82 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 MIR5701-1-201ENST00000585138 82 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AL121772.2-201ENST00000614331 297 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 MIR5701-2-201ENST00000615634 82 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AC004825.2-201ENST00000616634 455 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 AC112200.1-201ENST00000625015 234 ntBASIC4.22□□□□□ -1.73
BRF1Q92994 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.22□□□□□ -1.73
BRF1Q92994 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
BRF1Q92994 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF1Q92994 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRF1Q92994 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BRF1Q92994 AC106871.1-201ENST00000568324 3102 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 MIR423-201ENST00000362201 94 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 SNORD9-201ENST00000362566 104 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 Y_RNA.276-201ENST00000364732 109 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 SNORA63.7-201ENST00000365579 123 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 DBIP2-201ENST00000419076 262 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 AL035423.1-201ENST00000420331 213 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF1Q92994 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRF1Q92994 RPS6P12-201ENST00000432491 726 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.21□□□□□ -1.74
BRF1Q92994 AC013470.1-201ENST00000453438 462 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 ANP32BP2-201ENST00000454525 545 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 U8.21-201ENST00000459536 136 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 HMGN2P13-201ENST00000476476 274 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 RNU6-579P-201ENST00000516879 102 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 AP006245.1-201ENST00000522549 120 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.21□□□□□ -1.74
BRF1Q92994 AC040926.1-201ENST00000530195 238 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 TRAV28-201ENST00000557548 323 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 AC009314.1-201ENST00000603871 304 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 MIR8076-201ENST00000611401 83 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 AC004852.3-201ENST00000614131 326 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRF1Q92994 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRF1Q92994 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRF1Q92994 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.21□□□□□ -1.74
BRF1Q92994 ZNF299P-201ENST00000406845 1804 ntBASIC4.21□□□□□ -1.74
BRF1Q92994 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRF1Q92994 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF1Q92994 MTND5P7-201ENST00000413558 1798 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.2□□□□□ -1.74
BRF1Q92994 Y_RNA.210-201ENST00000364161 110 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 RNU6-827P-201ENST00000365553 106 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 MIR625-201ENST00000385047 85 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 MIR607-201ENST00000385241 96 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 U3.39-201ENST00000408569 239 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 RHEBP3-201ENST00000411920 351 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 ATP5A1P2-201ENST00000412323 255 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.2□□□□□ -1.74
BRF1Q92994 AC007919.1-201ENST00000429380 217 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
BRF1Q92994 OSTCP8-201ENST00000445117 448 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 AC009237.8-201ENST00000445492 379 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 RPS3AP46-201ENST00000448352 682 ntBASIC4.2□□□□□ -1.74
BRF1Q92994 CECR9-201ENST00000453421 199 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms