Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.579-201ENST00000390939 94 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 SKA2P1-201ENST00000425592 390 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 RPL21P66-201ENST00000426566 466 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AL360271.2-201ENST00000447710 161 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.06□□□□□ -1.76
RTF1Q92541 AC087884.1-201ENST00000469738 328 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.06□□□□□ -1.76
RTF1Q92541 SUMO2P6-201ENST00000505273 288 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 HMGB3P15-201ENST00000507326 574 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.06□□□□□ -1.76
RTF1Q92541 SNORA70.16-201ENST00000516390 95 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 RNU6-1256P-201ENST00000516539 103 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 RN7SKP272-201ENST00000516988 232 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 H3F3AP1-201ENST00000559984 334 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.06□□□□□ -1.76
RTF1Q92541 AC022432.1-201ENST00000595739 310 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC073539.2-201ENST00000597113 165 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.06□□□□□ -1.76
RTF1Q92541 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.06□□□□□ -1.76
RTF1Q92541 AC090132.2-201ENST00000615881 347 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 ATP5A1P2-202ENST00000616464 443 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC073476.4-201ENST00000628409 72 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC134503.1-201ENST00000633048 54 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AL512643.1-201ENST00000635735 524 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 MTND4LP32-201ENST00000636111 270 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.06□□□□□ -1.76
RTF1Q92541 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTF1Q92541 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RTF1Q92541 AL353746.1-201ENST00000566293 6881 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 ZNF807-201ENST00000328088 1707 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 RNU1-75P-201ENST00000347264 129 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 RNU6-593P-201ENST00000364716 112 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 RNA5SP189-201ENST00000364920 115 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 SNORD42.2-201ENST00000365570 69 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 MIR578-201ENST00000384828 96 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 SNORD67-201ENST00000390833 111 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 RN7SKP220-201ENST00000410611 288 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 RNA5SP31-201ENST00000411144 127 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.05□□□□□ -1.76
RTF1Q92541 BTF3L4P3-201ENST00000418879 476 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AL353729.1-201ENST00000425044 720 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AL590383.1-201ENST00000428602 75 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
RTF1Q92541 Y_RNA.639-201ENST00000458981 102 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AL160314.1-201ENST00000490836 438 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AC008716.1-201ENST00000511084 513 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 RNU6-323P-201ENST00000521915 107 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AL163153.1-201ENST00000554223 283 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 MIR1273C-201ENST00000578669 77 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 LRRC37A5P-203ENST00000580181 585 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AL591516.1-201ENST00000611326 274 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 AC084781.2-201ENST00000615568 161 ntBASIC4.05□□□□□ -1.76
RTF1Q92541 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RTF1Q92541 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RTF1Q92541 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.05□□□□□ -1.76
RTF1Q92541 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RTF1Q92541 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.05□□□□□ -1.76
RTF1Q92541 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RTF1Q92541 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTF1Q92541 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTF1Q92541 AC091152.2-201ENST00000591628 2569 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 MIR22-201ENST00000362190 85 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 RNU6-266P-201ENST00000364225 107 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 RNU6-370P-201ENST00000411008 104 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 RNU6-607P-201ENST00000411283 108 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.04□□□□□ -1.76
RTF1Q92541 RPL31P12-201ENST00000422587 358 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AL359672.1-201ENST00000442302 409 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.04□□□□□ -1.76
RTF1Q92541 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.04□□□□□ -1.76
RTF1Q92541 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.04□□□□□ -1.76
RTF1Q92541 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
RTF1Q92541 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.04□□□□□ -1.76
RTF1Q92541 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.04□□□□□ -1.76
RTF1Q92541 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.04□□□□□ -1.76
RTF1Q92541 AC069113.1-201ENST00000517763 267 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTF1Q92541 AP003072.1-201ENST00000531740 145 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 APOOP3-201ENST00000536787 586 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.04□□□□□ -1.76
RTF1Q92541 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.04□□□□□ -1.76
RTF1Q92541 AC100830.2-201ENST00000581636 240 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.04□□□□□ -1.76
RTF1Q92541 PART1_1.1-201ENST00000611761 217 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AC098657.3-201ENST00000620434 263 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 AC092628.2-201ENST00000622492 339 ntBASIC4.04□□□□□ -1.76
RTF1Q92541 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.04□□□□□ -1.76
RTF1Q92541 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.04□□□□□ -1.76
RTF1Q92541 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTF1Q92541 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RTF1Q92541 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTF1Q92541 AC008568.2-201ENST00000623862 2313 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.03□□□□□ -1.76
RTF1Q92541 SNORA31-201ENST00000362607 130 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 Y_RNA.128-201ENST00000363391 112 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms