Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-474P-201ENST00000384243 107 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RNU6-140P-201ENST00000384566 108 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RNU6-310P-201ENST00000384655 107 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 SNORA75.4-201ENST00000391278 119 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RPL5P18-201ENST00000406671 891 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC092573.2-201ENST00000434546 243 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 MTCO3P10-201ENST00000455912 772 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RNU7-187P-201ENST00000458985 68 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.631-201ENST00000459607 101 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RPS4XP13-201ENST00000483219 789 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC096576.1-201ENST00000489014 359 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC026782.1-201ENST00000512952 449 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.708-201ENST00000516950 96 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RNU6-1213P-201ENST00000517075 94 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC104576.1-201ENST00000524225 88 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 CASP1P1-201ENST00000526345 212 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 ZNF192P1-203ENST00000565888 810 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 MIR3171-201ENST00000584270 74 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 BNIP3P22-201ENST00000593399 556 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 SNRPGP17-201ENST00000603780 214 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC018462.2-201ENST00000605375 395 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC123912.5-201ENST00000605470 343 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AP000654.2-201ENST00000605633 586 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 PART1_1.1-201ENST00000611761 217 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.197-201ENST00000364004 102 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 RNU6-217P-201ENST00000384164 104 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 RNU6-166P-201ENST00000384371 107 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AL445529.1-201ENST00000398713 389 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 HSPE1P26-201ENST00000405341 275 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.646-201ENST00000410980 101 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC098614.2-201ENST00000426040 255 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 Z82205.1-201ENST00000428456 297 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 HMGN2P16-201ENST00000456802 261 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 RPS23P3-201ENST00000470993 430 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 RNU6-572P-201ENST00000516724 80 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC068657.1-201ENST00000520807 306 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC007458.1-201ENST00000542812 373 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 MIR4429-201ENST00000580105 73 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AL645944.1-201ENST00000603857 493 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 PISRT1.1-201ENST00000616930 107 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC012442.3-202ENST00000636742 206 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 MTND5P19-201ENST00000424872 1794 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 AC022336.2-201ENST00000568966 2538 ntBASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4AQ8WYN0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AL353746.1-201ENST00000566293 6881 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 FTLP6-201ENST00000355274 422 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 MIR148B-201ENST00000362252 99 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.162-201ENST00000363683 102 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.445-201ENST00000384168 102 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 RNU6-692P-201ENST00000384496 107 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 RNU6-306P-201ENST00000384617 107 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 MIR10A-201ENST00000385043 110 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 MIR559-201ENST00000385188 96 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.594-201ENST00000410373 140 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 RNU6-1050P-201ENST00000410388 107 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 RNU2-37P-201ENST00000410695 177 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AL096701.2-201ENST00000416920 238 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC007560.1-201ENST00000426912 237 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC007389.2-201ENST00000434630 306 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AL078601.1-201ENST00000444542 271 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC092798.1-201ENST00000458542 409 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 RPS27P29-201ENST00000463110 252 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 RPL9P32-201ENST00000464118 620 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 AC093663.1-201ENST00000497190 394 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4AQ8WYN0 ELOCP31-201ENST00000540463 467 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms