Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC016831.2-201ENST00000417179 352 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 NDUFA5P4-201ENST00000436704 385 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 MTND3P10-201ENST00000450967 341 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 BTF3P15-201ENST00000455606 336 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 RPL23AP67-201ENST00000465341 474 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 TBCAP3-201ENST00000512475 312 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC069113.1-201ENST00000517763 267 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC068657.1-201ENST00000520807 306 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC021739.1-201ENST00000559631 174 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 MIR4325-201ENST00000583049 90 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 MIR5692C1-201ENST00000585309 91 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 NUTF2P8-201ENST00000604593 363 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AL137843.1-201ENST00000605078 385 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AL121757.2-201ENST00000611223 313 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 AC091564.4-201ENST00000533934 2194 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 RNU6-898P-201ENST00000365627 104 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 Y_RNA.414-201ENST00000384011 101 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 U3.26-201ENST00000391236 204 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 UBA52P6-201ENST00000399822 382 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 RAP1BP3-201ENST00000407180 549 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 PGBD4P6-201ENST00000421501 610 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AL353678.1-201ENST00000422735 741 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 MTCO3P46-201ENST00000425787 232 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 MTND4P18-201ENST00000447010 465 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC233279.1-201ENST00000455300 423 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC110794.1-201ENST00000505816 425 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC107953.1-201ENST00000522216 297 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC006199.1-201ENST00000548728 219 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 MIR5004-201ENST00000579078 107 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC011712.1-201ENST00000588959 234 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 APOOP1-201ENST00000604695 592 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 FAM157A-202ENST00000615155 405 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC006386.2-201ENST00000624491 75 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC012005.1-201ENST00000624575 75 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 Z69720.2-201ENST00000624755 279 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 SCARNA4-202ENST00000625402 129 ntBASIC3.4□□□□□ -1.87
CCDC33Q8N5R6 AC008669.1-201ENST00000565823 2178 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 SNORA72.1-201ENST00000363485 129 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 RNU6-799P-201ENST00000363567 107 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 U3.37-201ENST00000408528 213 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AL353572.1-201ENST00000442490 417 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 TRBVA-201ENST00000498804 316 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AP000763.2-201ENST00000540641 163 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AL121579.1-201ENST00000555129 305 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC123912.5-201ENST00000605470 343 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC022306.2-201ENST00000617563 647 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 AC009248.2-201ENST00000619826 254 ntBASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC33Q8N5R6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 RNU6-254P-201ENST00000363377 107 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 SNORD113-7-201ENST00000363762 77 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 TOMM20P4-201ENST00000427861 435 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 PMCHL2-203ENST00000457791 237 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 RNU7-138P-201ENST00000459479 64 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 AC104472.2-201ENST00000469035 601 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 Y_RNA.687-201ENST00000516558 91 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 MIR3199-2-201ENST00000636243 86 ntBASIC3.38□□□□□ -1.87
CCDC33Q8N5R6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms